Conserved Protein Domain Family
RhoGAP_srGAP

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cd04383: RhoGAP_srGAP 
RhoGAP_srGAP: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in srGAPs. srGAPs are components of the intracellular part of Slit-Robo signalling pathway that is important for axon guidance and cell migration. srGAPs contain an N-terminal FCH domain, a central RhoGAP domain and a C-terminal SH3 domain; this SH3 domain interacts with the intracellular proline-rich-tail of the Roundabout receptor (Robo). This interaction with Robo then activates the rhoGAP domain which in turn inhibits Cdc42 activity. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when GDP-bound. The Rho family of GTPases activates effectors involved in a wide variety of developmental processes, including regulation of cytoskeleton formation, cell proliferation and the JNK signaling pathway. GTPases generally have a low intrinsic GTPase hydrolytic activity but there are family-specific groups of GAPs that enhance the rate of GTP hydrolysis by several orders of magnitude.
Statistics
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PSSM-Id: 239848
Aligned: 9 rows
Threshold Bit Score: 314.359
Created: 12-Apr-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative GTPasecatalytic
Feature 1:putative GTPase interaction site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                   #                                     
Q7Z6B7        502 KLFNGDLetfvk--dsgqVIPLIVESCIRFINLYGLQHQGIFRVSGSQVEVNDIKNSFERGENPLaddqsnhDINSVAGV 579  human
NP_502179     523 KLFGGSLdeyve--atgeEIPLLVQSAIAYLSRYSLRNQGLFRVSGSQSEINRFREAYERGEDLFqylddgsDANSAAGV 600  nematode
AAH54931      471 KLFNGDLlsyiq--asgqLIPAVVESCIRFINLNGLHHEGLFRVPGSQMVVNQLKDAFEKGDDPLtde--rcDMDSVAGV 546  zebrafish
AAH82447      486 SLASGRRmstlrkqdakqPIPLVVESCIRFLCRHGLRHVGIFRVSGSQVEVNDIKNAFERGEDPLeedqndhDLDSVAGV 565  African clawe...
NP_001025775  502 KLFNGNMetfik--dsgqAIPLVVESCIRYINLYGLQQQGIFRVPGSQVEVNDIKNSFERGEDPLaddqnerDINSVAGV 579  chicken
XP_690072     499 GTTRRNArtrnq--dsgqAIPLVVESCIRYINLYGLQQQGIFRVPGSQVEVNDIKNSFERGEDPLvddqsdhDINSVAGV 576  zebrafish
O43295        502 KLFNGSMeafik--dsgqAIPLVVESCIRYINLYGLQQQGIFRVPGSQVEVNDIKNSFERGEDPLvddqnerDINSVAGV 579  human
O75044        487 SLARRSStvrkq--dssqAIPLVVESCIRFISRHGLQHEGIFRVSGSQVEVNDIKNAFERGEDPLagdqndhDMDSIAGV 564  human
XP_624066     519 KLFGGSLeeyle--stnqEIPLIMKSCIRVINLYGLHHQGIFRVSGSQVEINNFREWFERGEDPLadvtdasDINSVAGV 596  honey bee
Feature 1          #   #                                                                    #  ## 
Q7Z6B7        580 LKLYFRGLENPLFPkERFNDLISCiridnlyeRALHIRKLLLtLPRSVLIVMRYLFAFLNHLSQYSDENMMDPYNLAICF 659  human
NP_502179     601 LKLYFRELREPIFPiFMFEQFCDCaksespteFVRRARELVSkLPVSHVLLLRFLFAFLSHLCEFADENMMEPHNLAICF 680  nematode
AAH54931      547 LKLYFRGLEKPLFPeDSYDQLMECgqiddetkKVTQLKLIVSsYPPSLIIVMRYLFAFLHHVSQYSDENMMQPYNLAVCF 626  zebrafish
AAH82447      566 LKLHFRGLTTPLFPkEIFHDLLSCvsmdniqeRAPNMRMVLLcLPASTIVLMRYLFSFLNHLSQFSDDNMMDPYNLAICF 645  African clawe...
NP_001025775  580 LKLYFRGLENPLFPkERFQDLVSTiktenpteRVHQIQQIIVtLPRAVIVVMRYLFAFLNHLSQYSDENMMDPYNLAICF 659  chicken
XP_690072     577 LKLYFRGLENPLFPkERFLDMISTvklessaeRAHHIQQIIVtLPRTVIIVLRYLFAFLNHLSQYSDENMMDPYNLAICF 656  zebrafish
O43295        580 LKLYFRGLENPLFPkERFQDLISTiklenpaeRVHQIQQILVtLPRVVIVVMRYLFAFLNHLSQYSDENMMDPYNLAICF 659  human
O75044        565 LKLYFRGLEHPLFPkDIFHDLMACvtmdnlqeRALHIRKVLLvLPKTTLIIMRYLFAFLNHLSQFSEENMMDPYNLAICF 644  human
XP_624066     597 LKLYLRELREPLFPiIYFEHLMELaqleskqeFVNKMKELISsLPRPVVIVMRYLFAFLNHLSEFSDENMMDPYNLAICF 676  honey bee
Feature 1                             #         
Q7Z6B7        660 GPTLMpvPEIQDQVscQAHVNEIIKTIIIH 689  human
NP_502179     681 GPTLLpiPEGKDQVfyHNYVNELVRNLIIH 710  nematode
AAH54931      627 GPSLVrgPNNGDAAe-LQRINALVKSIIIR 655  zebrafish
AAH82447      646 GPTLMcvPDNQDQVscQSHVNEIIKTIIIL 675  African clawed frog
NP_001025775  660 GPTLMhiPDGQDPVscQAHVNEVIKTIIIN 689  chicken
XP_690072     657 GPTLMpiPDGQDPVacQAHVNEVIKTIIMH 686  zebrafish
O43295        660 GPTLMhiPDGQDPVscQAHINEVIKTIIIH 689  human
O75044        645 GPSLMsvPEGHDQVscQAHVNELIKTIIIQ 674  human
XP_624066     677 GPTLVpvPEDKDQVqyQNQVNELIKNIITF 706  honey bee

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