Conserved Protein Domain Family
RhoGAP_ARHGAP22_24_25

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cd04390: RhoGAP_ARHGAP22_24_25 
RhoGAP_ARHGAP22_24_25: GTPase-activator protein (GAP) domain for Rho-like GTPases found in ARHGAP22, 24 and 25-like proteins; longer isoforms of these proteins contain an additional N-terminal pleckstrin homology (PH) domain. ARHGAP25 (KIA0053) has been identified as a GAP for Rac1 and Cdc42. Short isoforms (without the PH domain) of ARHGAP24, called RC-GAP72 and p73RhoGAP, and of ARHGAP22, called p68RacGAP, has been shown to be involved in angiogenesis and endothelial cell capillary formation. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when GDP-bound. The Rho family of GTPases activates effectors involved in a wide variety of developmental processes, including regulation of cytoskeleton formation, cell proliferation and the JNK signaling pathway. GTPases generally have a low intrinsic GTPase hydrolytic activity but there are family-specific groups of GAPs that enhance the rate of GTP hydrolysis by several orders of magnitude.
Statistics
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PSSM-Id: 239855
Aligned: 9 rows
Threshold Bit Score: 360.605
Created: 12-Apr-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative GTPasecatalytic
Feature 1:putative GTPase interaction site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                    #                                   
1177023      148 GVFGQRLDETVAYEqkfGPHLVPILVEKCAEFILehGRNEEGIFRLPGQDNLVKQLRDAFDAGERPSFDrdTDVHTVASL 227 human
AAS47033      26 GIFGQRLEDTVHHErkfGPRLAPLLVEQCVDFIRerGLSEEGLFRMPGQANLVRDLQDSFDCGEKPLFDstTDVHTVASL 105 house mouse
CAF97246       1 GVFGQRLEETVLYErryGVRLVPLIVEQCVGFIRdhGLQEVGLFRLPGQASLVQELQQAFDSGKRPSFDgnTDVHTVASL 80  Tetraodon nigro...
AAH75428     158 AVFGQCLVDTITYEkkyGRHTVPILMEKCADFIRekGMDEEGIFRLPGQDNLVKQLKEAFDAGERPSFSsdTDVHTVASL 237 western clawed ...
XP_420552    131 GIFGQKLEDTVRYEkryGNRLAPMLVEQCVDFIRqrGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDsnTDVHTVASL 210 chicken
XP_690939    153 GVFGKSLSDIMVYErkfGARLVPILVEKCAEFIRehGLVEEGIFRLPGQDNQVKQFREAFDAGERPSFPsdTDVHTVASL 232 zebrafish
XP_690970    133 GIFGQHLEDTVQYErkfGPRLAPLLVEQCVDFIReqGLKEEGLFRMPGQANLVKELQDAFDCGDKPLFDsnTDVHTVASL 212 zebrafish
NP_001026054 141 AVFGQCLAETMAYEqkfGQHQVPILVQKCAEFIRehGVNEEGIFRLPGQDNLVKQLRDAFDAGERPSFDrdTDVHTVASL 220 chicken
NP_112595     38 GIFGQKLEDTVRYEkryGNRLAPMLVEQCVDFIRqrGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDsnTDVHTVASL 117 human
Feature 1         #   #                                                                      #  #
1177023      228 LKLYLRDLPEPVVPWSQYEGFLLCgqltnadEAKAQQELMKQLSiLPRDNYSLLSYICRFLHEIQLNCAVNKMSVDNLAT 307 human
AAS47033     106 LKLYLRELPEPVIPFARYEDFLSCaqlltkdEGEGTVELAKQVSnLPQANYNLLRYICKFLDEVQAHSDVNKMSVQNLAT 185 house mouse
CAF97246      81 LKLYLRQLPEPLVPFSRYQTFLLCgqrllsaRAQGLGELKNLLCeLPFSNFNLLGFICRFLNEVQSHSSSNRTSVQNLAT 160 Tetraodon nigro...
AAH75428     238 FKLYLRELPEPAIPWRQYEDFLSCekmmsvdEEKGHGELMNQISiLPKENYNLLCFICRFLFEVQKNSSVNKMSVDNLSM 317 western clawed ...
XP_420552    211 LKLYLRELPEPVIPYAKYDDFLSCakmlskeEEMGLIELLKQVKsLPAVNYNLLKYICRFLDEVQSYSGINKMSVQNLAT 290 chicken
XP_690939    233 LKLYLRELPEPVVPWTQYQDFLDStlmldatTAAGKEKLEKQISlLPKVNYNLLSYICRFLFEVQQNSKVNKMSVENLAT 312 zebrafish
XP_690970    213 LKLYLRELPEPVIPFNKYEDFLTCaqlllkdEEMGLGELVKQVStLPQANYNLLKYICKFLDEVQSHSNENKMSVQNLAT 292 zebrafish
NP_001026054 221 LKLYLRELPEPVVPWIQYEDFLLCgqtldmdQKKGHQDLLKQLSlLPRDNYNLLSYICRFLYEVQLNSAVNKMSVDNLAT 300 chicken
NP_112595    118 LKLYLRELPEPVIPYAKYEDFLSCakllskeEEAGVKELAKQVKsLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLAT 197 human
Feature 1        #                       #              
1177023      308 VIGVNLIRSKVEDPAVIMRGTPQIQRVMTMMIRDHEVLF 346 human
AAS47033     186 VFGPNILRPQIEDPVTIMEGTSLVQHLMTVLIRKHGQLF 224 house mouse
CAF97246     161 AFGPNILRAKAEDPQSVTAGQTFLLAGGDLVAIATPPPT 199 Tetraodon nigroviridis
AAH75428     318 VIGVNLLKPQTEDPEALMRSAPQIQRLLTVMISHHEKFF 356 western clawed frog
XP_420552    291 VFGPNILRPKVEDPLTIMEGTVVVQQLMSVMISKHEELF 329 chicken
XP_690939    313 VMGVNLFKPQVEDAISMMKGTPMIQKVMTVMIRHHELLF 351 zebrafish
XP_690970    293 VFGPNILRPKIEDPVSMMEGTTQVQQLMTVLISEHERLY 331 zebrafish
NP_001026054 301 VIGVNLIRPKIEDPATIMRGTLPIQKVMTVMISNHADLF 339 chicken
NP_112595    198 VFGPNILRPKVEDPLTIMEGTVVVQQLMSVMISKHDCLF 236 human

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