Conserved Protein Domain Family
RhoGAP-ARHGAP11A

?
cd04394: RhoGAP-ARHGAP11A 
RhoGAP-ARHGAP11A: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP11A-like proteins. The mouse homolog of human ArhGAP11A has been detected as a gene exclusively expressed in immature ganglion cells, potentially playing a role in retinal development. The exact function of ArhGAP11A is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when GDP-bound. The Rho family of GTPases activates effectors involved in a wide variety of developmental processes, including regulation of cytoskeleton formation, cell proliferation and the JNK signaling pathway. GTPases generally have a low intrinsic GTPase hydrolytic activity but there are family-specific groups of GAPs that enhance the rate of GTP hydrolysis by several orders of magnitude.
Statistics
?
PSSM-Id: 239859
Aligned: 5 rows
Threshold Bit Score: 305.551
Created: 12-Apr-2006
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
putative GTPasecatalytic
Feature 1:putative GTPase interaction site [polypeptide binding site]
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                   #                                  
AAH70822    41 LFGTPLHCLPpcnm------eenIPQFVVDTCQFLSsHLGTEGLFRKSGSVTRIKTLKAQLeskgcslesaqPSDVAALL 114  African clawed frog
NP_998481   43 VFGVALEGLPhshvl----dygdLPCFLVDICTTLLdHLDTEGLFRKSGSVVRVKSLRAKLdqgedclsaalPLDIAGLL 118  zebrafish
AAH46258    53 VFGTSLHSLPyqylp----eygnVPVILVIACNYLEkHISTEGLFRKSGSVVRQKQLKAKLengenclstalPCDVAGIL 128  African clawed frog
7661858     46 IFGVPFNALPhsavp----eyghIPSFLVDACTSLEdHIHTEGLFRKSGSVIRLKALKNKVdhgegclssapPCDIAGLL 121  human
XP_974382   43 VFKVPLRSLSaetvtlktgqqiaVPKLVHELCSFILaKVSTEGLFRKEGSKARQNEIKLLLngggavdsnyhIIDVAALL 122  red flour beetle
Feature 1      #   #                                                                    #  ##  
AAH70822   115 KQFFRELPQPLIPlELQEPLCQIqempsdksKGSATILVTCLLPAIHVGTLKYFCTFLQRVASRCSENRMDSSNLAVVLA 194  African clawed frog
NP_998481  119 KQFFRELPEPVLTvDLHSAFLKAqelptaeeRTSATVLLSCVLPDTNLNTLRYFFSFLKTVSQRCAENKMDSSNLAVIFA 198  zebrafish
AAH46258   129 KQFFRELPEPLLPtDLQDAFYKAqslstdseRISATMLITCLIPEKNVHVLRYFFSFLHAVALRCDANKMNSSNLAVIFA 208  African clawed frog
7661858    122 KQFFRELPEPILPaDLHEALLKAqqlg-teeKNKATLLLSCLLADHTVHVLRYFFNFLRNVSLRSSENKMDSSNLAVIFA 200  human
XP_974382  123 KMFLRELPEPLIPyGYHELYLRCallekgrvRKEALLLACLLLPLEHLNTLSYLLQFFYDVTQHSVSNKMNAYNLAIVIS 202  red flour beetle
Feature 1                              #                     
AAH70822   195 PNLFastglgerltqsnerqLQLQTAVMQTLIDNASNIGQLPSFIL 240  African clawed frog
NP_998481  199 PNLFhcgdggekmssstekrLKHQAAAVQCLIENAQRIGVVPQFLM 244  zebrafish
AAH46258   209 PNLLqsnddgekispstekrLRVQAAVVQMLIDQAANIGCVPDFIL 254  African clawed frog
7661858    201 PNLLqtseghekmssntekkLRLQAAVVQTLIDYASDIGRVPDFIL 246  human
XP_974382  203 PAIFpieekls--phnmqmrTAKFCDIVQILIENAPEVGILPESII 246  red flour beetle

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap