Conserved Protein Domain Family
RRM1_MSSP1

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cd12470: RRM1_MSSP1 (this model, PSSM-Id:240914 is obsolete and has been replaced by 409900)
RNA recognition motif 1 in vertebrate single-stranded DNA-binding protein MSSP-1
This subgroup corresponds to the RRM1 of MSSP-1, also termed RNA-binding motif, single-stranded-interacting protein 1 (RBMS1), or suppressor of CDC2 with RNA-binding motif 2 (SCR2), a double- and single-stranded DNA binding protein that belongs to the c-myc single-strand binding proteins (MSSP) family. It specifically recognizes the sequence CT(A/T)(A/T)T, and stimulates DNA replication in the system using SV40 DNA. MSSP-1 is identical with Scr2, a human protein which complements the defect of cdc2 kinase in Schizosaccharomyces pombe. MSSP-1 has been implied in regulating DNA replication, transcription, apoptosis induction, and cell-cycle movement, via the interaction with C-MYC, the product of protooncogene c-myc. MSSP-1 contains two RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains), both of which are responsible for the specific DNA binding activity as well as induction of apoptosis.
Statistics
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PSSM-Id: 240914
Aligned: 3 rows
Threshold Bit Score: 168.463
Created: 15-Sep-2011
Updated: 1-Feb-2013
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P29558        55 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAK 134 human
NP_990355     22 GWDQLSKTNLYIRALPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAK 101 chicken
NP_001080407  23 GWDQLSKTNLYIRGLSPNTTDLDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAK 102 African clawed ...
P29558       135 QQEQDP 140 human
NP_990355    102 QQEQDP 107 chicken
NP_001080407 103 QQEQDP 108 African clawed frog
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