Conserved Protein Domain Family
RRM2_RBMS3

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cd12475: RRM2_RBMS3 
RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
This subgroup corresponds to the RRM2 of RBMS3, a new member of the c-myc gene single-strand binding proteins (MSSP) family of DNA regulators. Unlike other MSSP proteins, RBMS3 is not a transcriptional regulator. It binds with high affinity to A/U-rich stretches of RNA, and to A/T-rich DNA sequences, and functions as a regulator of cytoplasmic activity. RBMS3 contain two N-terminal RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains), and its C-terminal region is acidic and enriched in prolines, glutamines and threonines.
Statistics
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PSSM-Id: 240919
Aligned: 6 rows
Threshold Bit Score: 183.379
Created: 15-Sep-2011
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6XE24       139 PTNLYISNLPISMDEQELENMLKPFGHVISTRILRDAnGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGiPAPSEPL 218 human
NP_001070184 100 PTNLYISNLPVSMDEQELENMLKPFGHVISTRILRDAnGVSRGVGFARMESTEKCDVVIQHFNGKFLKTPPGvPAPTEPL 179 zebrafish
KGL72929      56 PTNLYISNLPVSMDEQELENMLKPFGHVISTRILRDAnGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGlPAPTEPL 135 white-throated ...
XP_005993767 137 PTNLYISNLPVSMDEQELENMLKPFGHVISTRILRDAnGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGvPAPTEPL 216 coelacanth
XP_007905196 257 PTNLYISNLPISMDEQELENMLKPFGHVISTRILRDAnGVSRGVGFARMESTEKCEVVIQHFNGKYLKMPPGvPAPNEPL 336 elephant shark
XP_018124785 136 PTNLYISNLPISMDEQELENMLKPFGHVISTRILRDAsGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGvPAPPEPL 215 African clawed ...
Q6XE24       219 LCKFADGG 226 human
NP_001070184 180 LCKFADGG 187 zebrafish
KGL72929     136 LCKFADGG 143 white-throated tinamou
XP_005993767 217 LCKFADGG 224 coelacanth
XP_007905196 337 LCKFADGG 344 elephant shark
XP_018124785 216 LCKFADGG 223 African clawed frog
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