Conserved Protein Domain Family
RRM2_RBM46

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cd12492: RRM2_RBM46 
RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 46 (RBM46)
This subgroup corresponds to the RRM2 of RBM46, also termed cancer/testis antigen 68 (CT68). It is a putative RNA-binding protein that shows high sequence homology with heterogeneous nuclear ribonucleoprotein R (hnRNP R) and heterogeneous nuclear ribonucleoprotein Q (hnRNP Q). Its biological function remains unclear. Like hnRNP R and hnRNP Q, RBM46 contains two well-defined and one degenerated RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains).
Statistics
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PSSM-Id: 240936
Aligned: 6 rows
Threshold Bit Score: 141.683
Created: 19-Sep-2011
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8TBY0       139 DNCRLFIGAIPKekKKEEILDEMKKVtEGVVDVIVYPSatdktkNRGFAFVEYEsHRAAAMARRKLipgtfqlwghTIQV 218 human
Q0P4R6       139 DNCRLFIGSIPQekRKEEILEEMKKVtEGVMDVIVYPSatdktkNRGFAFVMYEsHRAAAMARRKLipgpfqlwghTIKV 218 western clawed ...
Q08BH5       123 DNCRLFIGSIPKdkKKEEIQEEMMKVtEGVMDVIVYPSavdrmkNRGFAFVEYEsHKAAAMARRKLipgtfqlwghTIQV 202 zebrafish
XP_420372    139 DNCRLFIGAIPRekKKEEILKEMKRItEGVVDVIVCPDatdrtkNRGFAFVEYEsHRAAAMARRRLlpgtfqlwgrAVQV 218 chicken
XP_007904752 139 DNCRLFIGAIPKekKKEEILEEMRNVtEGVVDVIVYPSatdktkNRGFAFVEYEsHRAAAMARRKLipgtfqlwghTIQV 218 elephant shark
XP_014339424 119 DNCRLFIGAIPKekKKEEILEEMKKVtEGVVDVIVYPSatdktkNRGFAFVEYEsHRAAAMARRKLipgtfqlwghTIQV 198 coelacanth
Q8TBY0       219 DWADP 223 human
Q0P4R6       219 AWASP 223 western clawed frog
Q08BH5       203 DWAEP 207 zebrafish
XP_420372    219 DWACP 223 chicken
XP_007904752 219 DWADP 223 elephant shark
XP_014339424 199 DWADP 203 coelacanth
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