Conserved Protein Domain Family
Gene66

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pfam02053: Gene66 (this model, PSSM-Id:251060 is obsolete and has been replaced by 366894)
Gene 66 (IR5) protein
Statistics
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PSSM-Id: 251060
Aligned: 6 rows
Threshold Bit Score: 215.526
Threshold Setting Gi: 118639769
Created: 14-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P28965     1 MDGAYghvhngspmaVDGE-ESGAGTGtgaGADGLYPTS-TDTAAHAVSLPRSVGDFAAVVRAVSAEAADALRSGAGPPA 78  Equine herpesvirus ...
P18349    32 MDCAYgsp-----maVDGDvRTGGDCG---GGEGLYPTS-TDTAAHAVSLPRSVGEFASAVRAMSADAADALRRGAGPPP 102 Equine herpesvirus ...
O89265     6 CEVPSpqkqm-glwsVCRKlRRTSHLWpdpANEKVYGIL-SAGGVHISSLPKSVRGLARTVLTAAMVSFAAMKAGMPPSI 83  Gallid herpesvirus 1
Q77L62     7 MQL------------ADHMaNSPSSIWrtpREKSTYHLIyNTSNEHVASLPRSVRPLARIVVNAAETLQVGMRAGRPPSA 74  Turkey herpesvirus
BAA44956   1 MNRRW----------EDTNiESFNMTGv--AEMEMYPLR-GDSADHAETLPRSVRALFDALRVASCEAFCLMRLGGPPPA 67  Felid herpesvirus 1
ABL09566   1 MLPLY---------------------------QSLFPTW----------LSRSIKGM--------QEAYAALEAYRPPPA 35  Anatid herpesvirus 1
P28965    79 EAWPRVYRMFCDMFGRYAASpM-----PVFHSADPLRRAVGRYLVDLGAA-PvETHAELSGRMLFCAYWCCLGHAFACSR 152 Equine herpesvirus ...
P18349   103 EIWPRAYRMFCELFGRYAVSpM-----PVFHSADPLRRAVGRYLVDLGAA-PvETHAELSTRLLFCAHWCCLGHAFGCSR 176 Equine herpesvirus ...
O89265    84 HLWREIMDLTDATIRREQRS-T-----SNFYVAGSLRKIVSVALRNYKHA-P-ETHGEMDSRLTAIMYWCCLGHPGCCIV 155 Gallid herpesvirus 1
Q77L62    75 GVWREVFDRMMTAFRDHEPT-------ATFNAANPIRKMVETVLQNNEEP-P-RTHAEMGNRLMNIMYWCCLGHAGQCSI 145 Turkey herpesvirus
BAA44956  68 DIWPGVYRQYREVFRSYSRS-MegsggSPFHVADPIRHLVGRYLMGLGPAkP-ESHPELHTRLLYCAYWCCLGHAATCTH 145 Felid herpesvirus 1
ABL09566  36 HIWHEVYASFCSVYCEFRRT-K-----SLFHPVAPVRRLVGDMISSMTDT-P-TSHKDLSERLLFCSFWCCLGHAATCSM 107 Anatid herpesvirus 1
P28965   153 PQMYE--RACARFFETRLGIGETPPADAERYWAALLNMAGAEPELFPRHAAAAAYLRARGRKLPLQLpsahrtaktvavt 230 Equine herpesvirus ...
P18349   177 QAMYE--RECARFFEARLGIGETPPADSERYWVALLDMAGADPELFPRHAAAAAYLRTRGRKLPLPLppqagsa-tvsva 253 Equine herpesvirus ...
O89265   156 SHLYEenSDLIKLLGMATGCGESPLTEVESYWKPLCRAVAAKGNALIYDDVEVAHYLINVRQSSESSpp----------- 224 Gallid herpesvirus 1
Q77L62   146 WQLYEtnQAILSLLDEVVIGTTNPFCTLEQYWKPLCTAIANKGTSSLVEDAKVAEYLVSMRKL----------------- 208 Turkey herpesvirus
BAA44956 146 SHIYE--DACRRFFEEGFGAGEIPPADAVAHWNALYEMVLDEPELLVKHAAAAVYLQRRNYGGCIPN------------- 210 Felid herpesvirus 1
ABL09566 108 AWAYE--KTCLRFFSRPFWLWN----NAARYNRYVLATTCKAG----RYKSRYLSYRRRSRRKDLS-------------- 163 Anatid herpesvirus 1
P28965   231 gqSINF 236 Equine herpesvirus type 1 (strain AB4P)
P18349   254 sqSINF 259 Equine herpesvirus type 4 (strain 1942)
O89265   225 ddGEDI 230 Gallid herpesvirus 1
Q77L62   209 -----I 209 Turkey herpesvirus
BAA44956 211 ---IEk 213 Felid herpesvirus 1
ABL09566 164 --SVQD 167 Anatid herpesvirus 1
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