Conserved Protein Domain Family
HN_RTEL1

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cd13932: HN_RTEL1 
harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL)
Mouse Rtel is an essential protein required for the maintenance of both telomeric and genomic stability. RTEL1 appears to maintain genome stability by suppressing homologous recombination (HR). In vitro, purified human and insect RTEL1 have been shown to promote the disassembly of D loop recombination intermediates, in a reaction dependent upon ATP hydrolysis. Human RTEL1 is implicated in the etiology of Dyskeratosis congenital (DC, is an inherited bone marrow failure and cancer predisposition syndrome). Point mutations in its helicase domains, and truncations which result in loss of its C-terminus have been discovered in DC families. RTEL1 is also a candidate gene influencing glioma susceptibility. The C-terminal domain of RTEL1, represented here, appears similar to the N-terminal domain of the scaffolding protein harmonin.
Statistics
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PSSM-Id: 259826
Aligned: 23 rows
Threshold Bit Score: 88.4836
Created: 15-Feb-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative protein binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of the N-terminal domain of harmonin to an internal peptide of cadherin, and on the human CCM2 HHD dimerization interface

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                #  #   #            #  #  ##  #                          
NP_057518     877 KIRLVSHPEEPv-------aGAQTDRAKLFMVAVKQELSQANFATFTQALQDYKGSD--DFAALAACLGPLFAedPKKHN 947  human
ELR18157      842 ATSPIKRERGEe-------aAVTASEAQAYIRRVKGCLSPDEYKTFQSTLRDFRGKQi-ELAELMERVQQLFSg-SQRYP 912  Acanthamoeba ...
XP_001354453  902 KTEPKSNSSQQv--------KVAPESRADFLRELRSLISQDQFRDFGKVLIEYRSGTdeNFESLMTVLLDVLAa-PKMRY 972  Drosophila ps...
EKX53296      189 PKSTPQASSQNa-------aPEITMDAATYYQQVKRVLEPEQFREFSANIKRLNAGQq-SVDETLERVREIFG--EHRPF 258  Guillardia th...
Q7QEI1        891 QEPDVAAAANVk--------RVAPENRVDFLREVKCSLSAGSYKTFLQSLAVYNRNS--DFVLFIKQLCSCFNk-PHLHY 959  Anopheles gam...
AES68033      978 QKDNLPADSTP---------TSDGTQGSAFLAQVRDKLSAAEYIDFVGYMKALKTKTl-KISEVLLSISRLFSg-PERLP 1046 barrel medic
EFA02846      555 KITVIANRKSD---------KPVEASISEYIIMVKKTLSPEYFKQFINLLAIYRANC--DFNGLQTGLDEIFAtrHHLRY 623  red flour beetle
BAD52706      778 PGNSGAIHEKSg--------GQESNAGPAFLKLAREKLSTAEYRDFVEYMKALKLKTm-HIKDSLDAIAKLFSs-PERLP 847  Japanese rice
NP_178113     928 PESQGSASSSVltakgngggDKKEASASAFLSQVKEKLNTEEYKKFIGYMQALKKKEi-KLANVMQSIVQLFCg-SERDH 1005 thale cress
EEF34207      916 KSKGVQTTLVPc--------SDEEKRGSAFLIQVKEKLTAAEYKEFVGFMKALKSKAm-QIGSVLESIVKLFSg-PDRFP 985  castor bean
Feature 1                                        
NP_057518     948 LLQGFYQFVR--PHHKQQFEEVCIQLTGRGC 976  human
ELR18157      913 LLRDFVAFVP--PRHRATYLAMLPQEPTEDL 941  Acanthamoeba castellanii str. Neff
XP_001354453  973 LFIGMRRFLR--NEHKAEFDVRLASLNLAQE 1001 Drosophila pseudoobscura pseudoobscura
EKX53296      259 LFAQLQKLIRqvPRKKLVDKEWIPTEVLINK 289  Guillardia theta CCMP2712
Q7QEI1        960 LLLAMRRFIK--QEHTLEFDTIIEKIEARFF 988  Anopheles gambiae str. PEST
AES68033     1047 LLKRFKDYIP--AKYHSLYEQYVEGKVYFFA 1075 barrel medic
EFA02846      624 IIRGLEPYIK--DEHKSAFNVYCDAWLEARR 652  red flour beetle
BAD52706      848 LLEGFRVFVP--KNHLSLYEQLVQSYTVPNT 876  Japanese rice
NP_178113    1006 LLMGFKDFVP--VKYRPAYEECIKTRKRQSI 1034 thale cress
EEF34207      986 LLKRFKDYIP--AKYHSLYEHYLEATDRRLD 1014 castor bean

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