1N70,3GDC,1KBW,1KBW,2DV6


Conserved Protein Domain Family
CuRO_1_CuNIR_like

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cd04201: CuRO_1_CuNIR_like 
Click on image for an interactive view with Cn3D
Cupredoxin domain 1 of Copper-containing nitrite reductase and two-domain laccase
Copper-containing nitrite reductase (CuNIR), which catalyzes the reduction of NO2- to NO, is the key enzyme in the denitrification process in denitrifying bacteria. CuNIR contains at least one type 1 copper center and a type 2 copper center, which serves as the active site of the enzyme. A histidine, bound to the Type 2 Cu center, is responsible for binding and reducing nitrite. A Cys-His bridge plays an important role in facilitating rapid electron transfer from the type 1 center to the type 2 center. A reduced type I blue copper protein (pseudoazurin) was found to be a specific electron transfer donor for the copper-containing NIR in bacteria Alcaligenes faecalis. The two-domain laccase (small laccase) in this family differs significantly from all laccases. It resembles two domain nitrite reductase in both sequence homology and structure similarity. It consists of two domains and forms trimers and hence resembles the quaternary structure of nitrite reductases more than that of larger laccases.
Statistics
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PSSM-Id: 259864
Aligned: 5 rows
Threshold Bit Score: 182.69
Created: 20-Aug-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Type 1 (T1) CuType II Cutrimer
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1: Type 1 (T1) Cu binding site [ion binding site], 3 residue positions
Conserved feature residue pattern:H C MClick to see conserved feature residue pattern help
Evidence:
  • Structure:1N70; Rhodobacter sphaeroides nitrite reductase binds copper through a Type 1 (T1) copper site.
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                             #                       
1N70_A     30 INEFEMRIIEKEvqldedayLQAMTFDGsIPGPLMIVHEGDYVELTLINPPenTMPHNIDFHAATGalgg----ggltLI 105 Rhodobacter sphaer...
3GDC_A     34 LREWDIVAVDKDfeiapgiiFKGWSYNGrIPGPTLWAREGDALRIHFTNAG--AHPHTIHFHGVHRatmdgtpgigagSI 111 Arthrobacter sp. FB24
1KBW_F     38 KVRVKMETVEKTmkmddgveYRYWTFDGdVPGRMIRVREGDTVEVEFSNNPssTVPHNVDFHAATGqggg----aaatFT 113 Neisseria gonorrhoeae
1KBW_A     38 KVRVKMETVEKTmkmddgveYRYWTFDGdVPGRMIRVREGDTVEVEFSNNPssTVPHNVDFHAATGqggg----aaatFT 113 Neisseria gonorrhoeae
2DV6_A    163 TVRIDLETVEVKgqlddnttYTYWTFNGkVPGPFLRVRVGDTVELHLKNHKdsLMVHSVDFHGATGpgga----aaftQT 238 Hyphomicrobium den...
Feature 1                          #              #         
1N70_A    106 NPGEKVVLRFKATRAGAFVYHCAPGgpmipwHVVSGMAGCIMVLPR 151 Rhodobacter sphaeroides
3GDC_A    112 APGQSFTYEFDATPFGTHLYHCHQSpl--apHIAKGLYGGFIVEPK 155 Arthrobacter sp. FB24
1KBW_F    114 APGRTSTFSFKALQPGLYIYHCAVApv--gmHIANGMYGLILVEPK 157 Neisseria gonorrhoeae
1KBW_A    114 APGRTSTFSFKALQPGLYIYHCAVApv--gmHIANGMYGLILVEPK 157 Neisseria gonorrhoeae
2DV6_A    239 DPGEETVVTFKALIPGIYVYHCATPsv--ptHITNGMYGLLLVEPE 282 Hyphomicrobium denitrificans

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