Conserved Protein Domain Family
bZIP_NFIL3

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cd14694: bZIP_NFIL3 
Basic leucine zipper (bZIP) domain of Nuclear factor interleukin-3-regulated protein (NFIL3): a DNA-binding and dimerization domain
NFIL3, also called E4 promoter-binding protein 4 (E4BP4), is a Basic leucine zipper (bZIP) transcription factor that was independently identified as a transactivator of the IL3 promoter in T-cells and as a transcriptional repressor that binds to a DNA sequence site in the adenovirus E4 promoter. Its expression levels are regulated by cytokines and it plays crucial functions in the immune system. It is required for the development of natural killer cells and CD8+ conventional dendritic cells. In B-cells, NFIL3 mediates immunoglobulin heavy chain class switching that is required for IgE production, thereby influencing allergic and pathogenic immune responses. It is also involved in the polarization of T helper responses. bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.
Statistics
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PSSM-Id: 269842
Aligned: 15 rows
Threshold Bit Score: 86.6153
Created: 15-Aug-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:DNA binding site [nucleic acid binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                ## ### ###### ###                                    
Q90Z72         72 KDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLKAELLSLKLKFGLISS 131  chicken
NP_001071771   16 KNKDYWVRRRKNNEAARRSREKRRMNDLLLERRVLQLSEENKQLRAQLVALKIKYGDTED 75   Ciona intestinalis
XP_002739362   93 KDPVYWEKRRRNNEAAKRSREKRRINDIIMETKVLQLTKENSKLKAEIVALKRRFGVLDV 152  Saccoglossus kowalevskii
XP_002433590   53 KDDTYWDRRRRNNEAAKRSREKRRLNDMVLETRVLELAKENAVLRAELAALRDKFGIRGS 112  black-legged tick
AAM29449      119 KDESYWDRRRRNNEAAKRSREKRRYNDMVLEQRVIELTKENHVLKAQLDAIRDKFNISGE 178  fruit fly
ACJ65688      110 KDSTYWSKRPKNNESARRSRLKKRAIERTMEVKYKELQRENIELKHELAALKRHFADKLN 169  Haliotis discus discus
CCD80405      371 KDDKYWERRRKNNEAAKRSREKRRQNDILMECRINQLQIQNHKLHHELIELKLRFNIPLN 430  Schistosoma mansoni
AGX93009      146 KDDNYWMKRRKNNEAAKRSREKRRYNDIAMGTKILDLTSENDNLRRELISLKRKFNLPID 205  Dumeril's clam worm
ETE64192       38 KDTIYWEKRQKNNESAKRSREKRRFSYFAIENQMAALQEENFHLRWELQDLKVRCGLLNH 97   king cobra
ESO00716       17 KDKEYWMKRQKNNAAAKKSREKRRLNDVVLTNQIVQLTNENKRLKVELQAIKQRFGLSIS 76   Helobdella robusta

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