1B55,2LUL,2Z0P,2Z0P


Conserved Protein Domain Family
PH_Btk

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cd01238: PH_Btk 
Click on image for an interactive view with Cn3D
Bruton's tyrosine kinase pleckstrin homology (PH) domain
Btk is a member of the Tec family of cytoplasmic protein tyrosine kinases that includes BMX, IL2-inducible T-cell kinase (Itk) and Tec. Btk plays a role in the maturation of B cells. Tec proteins general have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. The Btk PH domain binds phosphatidylinositol 3,4,5-trisphosphate and responds to signalling via phosphatidylinositol 3-kinase. The PH domain is also involved in membrane anchoring which is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain. This results in severe human immunodeficiency known as X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice.PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Statistics
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PSSM-Id: 269944
Aligned: 44 rows
Threshold Bit Score: 158.16
Created: 4-Feb-2003
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:phosphoinositide binding site [chemical binding site]
Evidence:
  • Structure:1B55; Human BTK PH domain binds Ins(1,3,4,5)P4
    View structure with Cn3D
  • Comment:mutations in the PH domain of Btk cause severe forms of the human disease XLA; in most cases these are located around the inositol phosphate binding site
  • Citation:PMID 9218782
  • Structure:2ZOP; Human BTK PH domain binds 4PT, contacts at 4A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               # ## # #     #   #                         #                              
1B55_A          5 LESIFLKRSQQK-KKTSPLNFKKRLFLLTVHKLSYYEYdfe-rgRRGSKKGSIDVEKITCVETVVPEknppperqiprrg 82   human
EGD72208        9 LDGMMLKRSLGK-KAIGPKKWTDRYFVMTESTLYYYTSp-----SKDKLKGTIDLASVRGVEEVMPEa------------ 70   Salpingoeca s...
EFW45363       12 MQGHLLKRAQGMrFTTLMKNFEWRYFVLRNDAVSYYDAdh---eNPSKLKKSLQISKFRAIEIVEDSt------------ 76   Capsaspora ow...
EGD76238       21 MSGMMYKRAQGR-STFGRTNWKKRWFVLHPGELSYWTLeggrnnPASECKGVIPLSNVYTLERVSLEa------------ 87   Salpingoeca s...
XP_001745403  897 KRGVLWKKAQGT-SLLGRDNFKRRTFILTDTCLSYYSGvd---iSEMKQKGQIPLTKIRAVEVAHATp------------ 960  Monosiga brev...
BAG55524        9 RQGMMMKRAQGK-SALGPINWKARFFVLLPDELSYWDEfgggtnPQAKKKGAIPTAKIHAVEEVPDTt------------ 75   Monosiga ovata
XP_001743995  105 LVGTLLKRAQGK-STFGRMNWKQRWFVLYENELQWWSAeggrynTQAELKGAIDLASIHAVEHVSYDa------------ 171  Monosiga brev...
EGD74450       11 RRGVLEKRAQGK-SAITHFTFRKRTFVLTPSSLNYYKGva---tEDLKLRGSIPLQSIRSCERCDGSv------------ 74   Salpingoeca s...
XP_002117053  551 KEGWLTKRSRNRkDPKKEANYRDRYVRMTTECLSYYITn----kANAVPKDSMKLKDVTIVEAVTDGtf----------- 615  Trichoplax ad...
BAG55514       10 LDGLMLKRAQGK-STFGKMTWKDRMFELKSDSLHYYLP------DKSKEKGTIDLSDVLAVEAVDLRa------------ 70   Codonosiga gr...
Feature 1                                                                                         
1B55_A         83 eessemeqisiieRFPYPFQVVYDe-GPLYVFSP---TEELRKRWIHQLKNVIRYNSDLVQKYHPCFWIDGQYLCCSQTA 158  human
EGD72208       71 ------------fSRPYMFQLIRDd-HTLYCQCQ---SILDQRRWLEGLRRRASKNPHLLSKFHKGVVTSGKWTCCGGAK 134  Salpingoeca s...
EFW45363       77 ------------fQRAAMFQIIHEd-AILYCGAA---NDQERTAWMNALRAVFAVLPNKYSTYHRGAYVKGNWTCCRAKH 140  Capsaspora ow...
EGD76238       88 ------------fGKPHMIQIVHT--SVLYVQCP---SREDCDEWLLALRKQCATNRILHAKYHPGFFDGSKWSCCGITS 150  Salpingoeca s...
XP_001745403  961 ------------wGRSNMIQVVHDd-AILYVDAEsqaERQDWIDEIRSACQEGQNVSSKHYNYHPGVFHKGEWTCCATKE 1027 Monosiga brev...
BAG55524       76 ------------fSRQFMFQVVHGdaSSVLYIQS---SDNTDRAEWIAVLRKLIVPAAHHSVYHPGCFESSRWSCCSESS 140  Monosiga ovata
XP_001743995  172 ------------fTKAHMFQLVHT--SLLYIQCN---TKRECDKWVSTLRKLVAHNTFLHPKFHPGFFDERDKVWSCCGI 234  Monosiga brev...
EGD74450       75 ------------wDRPSLIQVVHDe-ATLYISAAnsaQLADWIEDIRRACMLPQNRSSKHKLYHPGVFFRGKWTCCNLAS 141  Salpingoeca s...
XP_002117053  616 ------------gERKYFFQVGSKg-DLLYAHAM---NPTDRDEWVLALRQCCQRLKLNMDRRYHPGAYTDKWSCCQAVD 679  Trichoplax ad...
BAG55514       71 ------------fKRPFMFQVVRPd-YILYCQCS---SQLDLKRWLEALRRRIAGNPNRSTHFHTCHFDGRWKCCRTPKE 134  Codonosiga gr...
Feature 1                    
1B55_A        159 KNAMGCQILEN 169  human
EGD72208      135 DCEGCGPCFDY 145  Salpingoeca sp. ATCC50818
EFW45363      141 EAAHGCDTCFM 151  Capsaspora owczarzaki ATCC 30864
EGD76238      151 KDFKGCQKSFD 161  Salpingoeca sp. ATCC50818
XP_001745403 1028 QGGGCKPAFKY 1038 Monosiga brevicollis MX1
BAG55524      141 KTTLGCKPTTP 151  Monosiga ovata
XP_001743995  235 PSRDFKGCLTA 245  Monosiga brevicollis MX1
EGD74450      142 ASGGCKAAFRY 152  Salpingoeca sp. ATCC50818
XP_002117053  680 LSQNGCQHAFD 690  Trichoplax adhaerens
BAG55514      135 TSGCTPCFDYS 145  Codonosiga gracilis

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