Conserved Protein Domain Family
PH_GAP1-like

?
cd01244: PH_GAP1-like 
RAS p21 protein activator (GTPase activating protein) family pleckstrin homology (PH) domain
RASAL1, GAP1(m), GAP1(IP4BP), and CAPRI are all members of the GAP1 family of GTPase-activating proteins. They contain N-terminal SH2-SH3-SH2 domains, followed by two C2 domains, a PH domain, a RasGAP domain, and a BTK domain. With the notable exception of GAP1(m), they all possess an arginine finger-dependent GAP activity on the Ras-related protein Rap1. They act as a suppressor of RAS enhancing the weak intrinsic GTPase activity of RAS proteins resulting in the inactive GDP-bound form of RAS, allowing control of cellular proliferation and differentiation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Statistics
?
PSSM-Id: 269950
Aligned: 20 rows
Threshold Bit Score: 148.976
Created: 4-Feb-2003
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
AAD09006     568 REGYLLKRKEEpa-gLATRFAFKKRYVWLSGETLSFSKspeWQMCHSIPVSHIRAVErVDEGAFQLPHVMQVVTQDgtg- 645 human
XP_003226069 555 KEGYLHKRRAEgl-pLVSRFTFKKRYFWLSKESLSYSKspeWQVRTSIPVQRICAVErVDENAFQQPHVMQITTRDagg- 632 green anole
NP_001008049 574 KEGFLHKRKAEav-nLVTRFTFKKRYFWLSSQTLSYSKspdWQVRSSIPVHRICAVErVDENAFQHPNMMQIISQDsetq 652 western clawed ...
CAF93132     539 KEGYLHKFKTEgp-qLLSRFAFKKRYFWLTSETLTYAKspdWQVRSSIPIQCVCAVErVDENAFQQQNVMQLVTQNnvg- 616 Tetraodon nigro...
XP_002933873 569 KEGQLMIYKTKgk-gYLLASSFKKFFITLTPDALSFAKssySKKSSVIPLSKIRALEkVEEKCFGSSNVMQIIYTDete- 646 western clawed ...
O43374       569 KEGPLFIHRTKgk-gPLMSSSFKKLYFSLTTEALSFAKtpsSKKSALIKLANIRAAEkVEEKSFGGSHVMQVIYTDdag- 646 human
NP_001092921 566 KEGFLFLHRTKdk-cMPMTSPFKKYYVTLSKDTLSYSRtlhSKKSSSISLPKIRAVEkVEEKCFGSANVMQIISSEdsg- 643 zebrafish
XP_003390536 397 REGYLVKRALAr--kKISVKNFKRRYFVLSDAGLSYSKargDLIINVIPLEDMLAVErVDETAFNMKFMLQLIQPE---- 470 Amphimedon quee...
XP_002667523 556 KEGEIHKRAQGk--kRIGKKNFKKRWLRVTNQELSYHKqkgKEALCVIPVKHILGIEkLEESAFNRKNMFQVIHSE---- 629 zebrafish
XP_001199281 425 SILYMIKRAQGrkrlGIGMKNFKRRWFRLTNRELTYSKsddCLPLCTIPISDVLAVEkLEEESFQMKFMFQVVQPK---- 500 purple urchin
AAD09006     646 alHTTYLQCKNVNELNQWLSALRKASAPNPNKLA 679 human
XP_003226069 633 qvLTTYIQCKNVNELNQWLSAIRKVTVSNDCMLP 666 green anole
NP_001008049 653 ggHIMYIQCKNVNELNQWLSALRKVSLCNQRLLP 686 western clawed frog
CAF93132     617 evHIVYIQCKNVNELNQWLSAIRKVSIYNERMLP 650 Tetraodon nigroviridis
XP_002933873 647 nlEALYLQCKSVNELNQWLSALRKVCVNNPDMLC 680 western clawed frog
O43374       647 rpQTAYLQCKCVNELNQWLSALRKVSINNTGLLG 680 human
NP_001092921 644 qqETLYLDCKSVNELNHWLSALRKACSHNTNTMS 677 zebrafish
XP_003390536 471 --RVLYLQAKNSVDQLEWLSALAKACYVHHSDTM 502 Amphimedon queenslandica
XP_002667523 630 --KPLYVQASNCVETNSWIEVLSQVSRCNPGRLS 661 zebrafish
XP_001199281 501 --RALYVQASNCVEEKAWVDMLSNICKSNRHRLS 532 purple urchin
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap