Conserved Protein Domain Family
NHL_like_1

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cd14953: NHL_like_1 
Uncharacterized NHL-repeat domain in bacterial proteins
This bacterial family of NHL-repeat domains is found in a variety of domain architectures. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.
Statistics
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PSSM-Id: 271323
Aligned: 77 rows
Threshold Bit Score: 306.764
Created: 21-Mar-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
  next features
Feature 1:NHL repeat [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                   ####################  ###########       #####         
AHJ99022        4 TVKTLAGNGIDGFANGl-gTIAQFNGPEGAAVDNQGNVYVADTGNN--CIRKITPTGEVttl-aggSAEGFVNgpaas-- 77   Hymenobacter ...
YP_822504     347 IDTVAGDGYAHSVGDGaaaTSAILHQPSAIALDSKGNLYIADTGTQ--RVREVLPNGVMttl-agtGVVGRDTgdavpag 423  Candidatus So...
WP_017945164   18 ISTVAGTGVAGPHGDLgpaVSAQLNRPSGVVVDGAGSLYVADYSHRvrKITSDGRIGTVag----tGAAGFGGdggpav- 92   Streptomyces ...
WP_018973449  145 ISTFAGGGFGGDGSAA---TAASLNFPSGLAFDGSGNLYIADTTSH--RIRKVTAADGKintiagtGTAGYSGdgaaaa- 218  Rudaea cellul...
WP_003955166   37 ISTVAGTGVAGFTGDNgpaVAAQLNRPYGIAVDSAGTLYFSDYNNH--RVRKITTDGKVstv-agiGSAGYRGdngpav- 112  Streptomyces ...
WP_018511575   23 ISTVAGTGAAGFKGENepaVTAHLKHPYGIAIDSVGTLYFSDYSNH--RVRKITTDGKVrtv-agtGAAGYGGddgpat- 98   Streptomyces ...
WP_018961914   18 ISTVAGTGVAGFAGDDelaLSAQLNRPYGIAVDSTGTLYFSDFYNH--RVRKIATDGKIsav--agAGAGYRGddgpaa- 92   Streptomyces ...
WP_023421616   19 ISTVAGTGVAGFKGENelaVAAQLNRPYGIALDSSGSLYFSDYNNH--RVRKISTDGKIctv--agAGAGYRGdngpav- 93   Streptomyces ...
YP_002754275   55 TATVAGTGSAGYSGNGgaaTSAAFASPSAVAYDGSGNLYIADTNNN--VIREVSTTGVVtti-agnGEEGYSGdgaaat- 130  Acidobacteriu...
YP_822504      29 IDTVAGSGRIGDGGPA---TAAQFSDMSGIAADRLGNLYVADTNNH--RVRKVSLGGTVtti-agtGIAGFSGdgglav- 101  Candidatus So...
Feature 1                                                                                         
AHJ99022       78 -arfyGPIDVALDGGGNLLVADyANHCIRKITPAGVv-STFAGTGVagytdgna--skaqfngPSGLTVD-EQGTVYVAD 152  Hymenobacter ...
YP_822504     424 iaplnSPMGLAVDGAGNVMVADaFNHRVVAINALHVl-RPVAGTGTggvsadgtaalsaalrgPKGVCLD-RGGTLYIVD 501  Candidatus So...
WP_017945164   93 saqlnYPRGLAVDGADAVYIADgNNHRIRKVTADGRi-STVAGTGAagfagdggpataarlhtPLSVTVD-STGNLYIAD 170  Streptomyces ...
WP_018973449  219 saqlnSPYGIALDGAGNVYVADrLNHRIRKITAVDGkiATIAGNGVqgysgdggpataaqlfvPHAVAVDaAGNNIYIAD 298  Rudaea cellul...
WP_003955166  113 saqlnCPREVAVDGAGAVYVTDaENHRVRKITADGTi-STVVGTGVagfsgdggpataarlnrPFGVAVD-STGVLYVTE 190  Streptomyces ...
WP_018511575   99 sarlnCPRELAVDRAGALYIADaENHRVRKVTPGGQi-MTVAGNGSagfggdggpatsarlnkPFGVAVD-GSGVLYIAE 176  Streptomyces ...
WP_018961914   93 lallnSPREIAVDTTGTVYITDsANNRVRKITPDGRi-STVAGTGTagfsgdggpaakaqlnyPLGVAVD-STGALYICD 170  Streptomyces ...
WP_023421616   94 saqlnCPREVAVDAAGSVYITDaANHRVRVITTDGKi-STVAGTGTagfsgdggpaakaqlnyPLGVAVD-STGALYISD 171  Streptomyces ...
YP_002754275  131 samldTPTGIAVDSNGNIYIADsHNNRIREVSNGII--NTVAGNGTagysgdgaaatsamlddPTAVAVD-ASGNIYIAD 207  Acidobacteriu...
YP_822504     102 narlnLPYGLALDDFGNIYVADlGNERVRRIGSDGAi-VTIAGNGRrasspdgagpldtsllsPRNIAID-GKGNLYIAE 179  Candidatus So...
Feature 1                                                                                         
AHJ99022      153 GeNYCIRKITAAGi-VSTLAGNgtrgfa--dgpgstAQFRGPEGLVLDRkGTLYVADfaGYRIRKVTTng-tvSTVAGTG 228  Hymenobacter ...
YP_822504     502 TsNHRVLRLAADGt-VQTVAGNgsggyagdggsarfAQLRVPGACAFDGkGNLYIADtgNHSIRKVTAdg-viSTVVGNG 579  Candidatus So...
WP_017945164  171 HgNHRIRKITADGt-ISTVAGTgaagftgdggpaasAQLHGPYAVAVDGeDGLCVADcgNHRVRRITAdg-kiSTVAGTG 248  Streptomyces ...
WP_018973449  299 WqNHRLRKITTADgkITTIAGNgsanysgengpaaaAQLNYPTALSLDAaGNLFVSDynNFRVRKIAAadasiTSVAGNG 378  Rudaea cellul...
WP_003955166  191 YnNNRIRKVAADGt-ISTVAGTgatgnrgddgpaasAQLNRPYGVAVDGaGAVYIADtdNHRIRKITAdg-tiSTVAGTG 268  Streptomyces ...
WP_018511575  177 WgNDRIRKVTPDGt-ISTIAGTgkaayggddgpalsAHLRAPYSLVLDDaGALYIADasNHRVRKITPdg-qiTTVAGNG 254  Streptomyces ...
WP_018961914  171 HrNSRVRKVTADGn-ISTVAGTaaagfkgdgepavsAQLKTPYGLAVDGaDELYIADagNHRVRKVASdg-tiSTVAGNG 248  Streptomyces ...
WP_023421616  172 HgNHRVRKISADGn-ISTVVGTgvagfkgddgpaasAQLNRPYALAVNDaDILYITDgnNHRVRKIAAdg-siSTVAGTG 249  Streptomyces ...
YP_002754275  208 TgNQRIRNVAAGT--IHTVAGNgeegysgdgaaaasAELDTPTGIAVDSsGNIYIADshNNRIREVSGgv--iNTVAGSG 283  Acidobacteriu...
YP_822504     180 FeGHRVRRLSADGr-LVTVAGTgiaglggdgfasvkAQVNYPAGLAFDRaGALYIADsgNNVVRKIFAdg-tiGTVLGRQ 257  Candidatus So...
Feature 1                                                                                         
AHJ99022      229 IRgyadgag------ntaqfaAPTGVTFDSQGNLYVADTgNNCVRKITPAGEVStvagtrtmGFADGt--VDKAQFINPS 300  Hymenobacter ...
YP_822504     580 TVgasgdega----aasarlaSPRGLTVDDNGNLYIGDTgNNRVRQVTADGIMHtiagtgpaGFAGDggpAADAALDGPA 655  Candidatus So...
WP_017945164  249 SAgftgdggp----ataarlhTPLSVTVDSTGDLHIADHgNHRIRKITADGTIStvagtgsaGFAGDggpAASAQLHNPF 324  Streptomyces ...
WP_018973449  379 TPgwsgdgga----atsaqlgTYLHIAVDATGNLYIADNeNHRIRKVATNGTIStfagngtqGFSGDggaATSAQLNSPG 454  Rudaea cellul...
WP_003955166  269 TGgfdgdggp----ataarlnRPMGVVIDSTGTLYVADYgNHRIRKITTDGKIGtvagtgtgGFGGDggpPASAQVNNSL 344  Streptomyces ...
WP_018511575  255 SAgfggdngp----atsaklnRPYGLARDSTGNLYISDFeNHRVRKVTPDGQIStvagtkgaGYGGDggpASAAQLNQPY 330  Streptomyces ...
WP_018961914  249 VGsfggdggp----atsaqlnFPLGVVVDSTGTLYISDYnNHRVRKVVSDGTIStvagtgaaGYGGDdgpAASAQLNKPF 324  Streptomyces ...
WP_023421616  250 TAgfsgdggp----stsaqlnLPLGVAVDSVGTLYISDYnNHRVRKVTPDGEITtlagkgtaGFGGDdgpAAAAQLNNPF 325  Streptomyces ...
YP_002754275  284 AVtfpgsysgdggsataatlaKPTGVALDAAGHVYIADTnNERLREIANGVIATvagn-gqqGYSGDgaaATSAALNDPR 362  Acidobacteriu...
YP_822504     258 GTql----------------fNPLGIAVDGAGTIYVGDS-TFRVAAYTVAGKWLqyagngapIFSGDggpAKDAGLTSVN 320  Candidatus So...
Feature 1                                 
AHJ99022      301 GLTIDtkGTLYLTEY--GHRIRTI 322  Hymenobacter sp. DY53
YP_822504     656 GLFLDgsGALYFADSn-NNRVRRL 678  Candidatus Solibacter usitatus Ellin6076
WP_017945164  325 GLAVDcvDTLYIADHv-NNRVRRV 347  Streptomyces sp. CNS615
WP_018973449  455 GIAFDgaGNLYIAEQl-GQRVRKV 477  Rudaea cellulosilytica
WP_003955166  345 GVAVDcvDTLYIADYg-NHRVRKV 367  Streptomyces clavuligerus
WP_018511575  331 GLAVDcvDALYIVDHv-NHRIRKI 353  Streptomyces sp. ScaeMP-e10
WP_018961914  325 GLAVDcvDNLYIADHf-NHRVRKI 347  Streptomyces sp. CNB091
WP_023421616  326 GLAVDcvDTLYIADHl-NNRVRKV 348  Streptomyces sp. GBA 94-10
YP_002754275  363 NASVNasGSVAVADTl-NERVRGL 385  Acidobacterium capsulatum ATCC 51196
YP_822504     321 DLAVDvtGVLYIADGvrVRRVAST 344  Candidatus Solibacter usitatus Ellin6076

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