Conserved Protein Domain Family
NHL_like_6
?
cd14962: NHL_like_6 
Uncharacterized NHL-repeat domain in bacterial proteins
The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.
Links
?
Statistics
?
PSSM-Id: 271332
Aligned: 26 rows
Threshold Bit Score: 329.933
Created: 21-Mar-2014
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
Download Cn3D
  next features
Feature 1:NHL repeat [structural motif]
Evidence:
  • None
Scroll to Sequence Alignment Display
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
Feature 1                       ####### ########################### #####                        
BAO29271      81 IVGEEKAaq--rLTQPYGIALH-KGKLYVADTGAGGLAIFDLAQQRFSFMtGNGAGr--IKRPINIRIDADGTRYVTDTg 155 Sulfuritalea hy...
WP_009552636  74 LTGERLPte-raFEKPVAVAAR-AGRIYVADSVRRHVVVFDVPRRKVFLM-GLRAPg-tLVKPSAMALDAQGNLYVADAt 149 Burkholderiales...
WP_018989477  88 VTGAQRTgh--fMSKPYAVAVH-RGRVFVSDTAELKVKVFDIPAGKYFTI-GEEEPg-qLAKPLGLDVDRAGRLYVADSt 162 Azoarcus tolucl...
YP_007549670  89 VTGASRAgy--fLTKPYAVAVH-KGRIFVSDTAEHAVKVFDIPSGKYFTI-GDTEPa-tLAKPLGLDVDRAGRLYVADAt 163 Azoarcus sp. KH32C
YP_007552151 126 LTGPSSKpgepaYRKPSALAAR-NGRIYVADPPTNSIVVFDVPRGRVFQI-GVREPn-nVTSPTSLAIDGENNVYVLDAk 202 Azoarcus sp. KH32C
YP_521544     80 LLGEEKVed--aLVRPYGVAMS-DSKIYVADSRGPGLAVFDLKTRKFSLMsGSGAGr--MQRPINVAIDADDTKYVTDTa 154 Rhodoferax ferr...
YP_589825    104 GNGKNGPkqrfaLATPYGMAVDsKGLLYVADGKVGAIFIFNTETHDVDMI-KNGVQa-hFGLITGLTIDDGDRLFVSDSq 181 Candidatus Kori...
WP_018992348  89 LTGRSAPtaepvYRKPAALAAR-NGRVYVADPAINAIIVFDVPRARAYKI-GVREPn-hILRPISMAIDGQGDLYVLDSi 165 Azoarcus tolucl...
YP_001793152  72 VTGEQLGge--aLAKPYAVAVW-RGRIFVSDTVSRFVRVFDVPQGSHARIgDEEGEg-qLIKPIGLDVDAAGNLYVADIg 147 Leptothrix chol...
WP_009552664  87 GLTEREPas-vvLQRPQTGMVDaRGRVLVTDVSRGAVFVFDEAQGKLAVW-EQASPtqrFVAPVGIAAGPDGQVYVADAe 164 Burkholderiales...

Feature 1                                                                                        
BAO29271     156 RDQVLVFDREDRFVKAFGVEGQf--RPVDLAIA--GDRLYVADIa-----HHQVHVLEKGTgRLLFKFGKAGs------- 219 Sulfuritalea hy...
WP_009552636 150 LRKVLVYDALGLFLRNVGQPEEl-kRPTGVAVSpdGKRVYLVDRsdndsdDHRVLAYDGQG-AMLRQIGKRGs------- 220 Burkholderiales...
WP_018989477 163 HKMIFIYNRDGKFLRKIGGSDLf-dRISSVTVDpsGQRIYVVDIggvkseNHRIRVFDTATgRHIRDIGKRGs------- 234 Azoarcus tolucl...
YP_007549670 164 LKMIFIFDRDGKFLRKIGGNNLf-dRISSVTVDpsGRRIYVVDIggvkseNHRIRVFDTVTgQHVMDIGKRGs------- 235 Azoarcus sp. KH32C
YP_007552151 203 RHQVMVYDSLGLFMYAVGNPKEl-sKPSGVAVSddGQKIFIVDRgtvdgnDHKVIAYSPDN-RELFRIGPRGs------- 273 Azoarcus sp. KH32C
YP_521544    155 RNQVLVYDKGDRYLAAYGGKDEf--KPVDVAIA--GDRLYVVDIe-----HHEVQVLDKRSgKLQFKFGKSDv------- 218 Rhodoferax ferr...
YP_589825    182 LHRVLVFGPDRKQEAVISEGLV---DPGGMAVDneNRFLYVADPa-----LDQVLVYDADKfNLIRKMGTSGknh---al 250 Candidatus Kori...
WP_018992348 166 LGKVMVYDAVGLFRYSVGNGKDw-tRAAGVAVSkdGKKIFVVDRgsvegdDHKIIAYAPDG-AELFRIGPRGr------- 236 Azoarcus tolucl...
YP_001793152 148 ARAILVYGPDGRYQRRIGGGAQsfvRLASVTVDpaGARVYAVDLggvssdQHRVRVFDARSgAHLSDIGQRGt------- 220 Leptothrix chol...
WP_009552664 165 LGRVFRLGPEGQPLGALGAGLLq--RPTGLARDplQQRLFVADTr-----AHDIKVFDDAG-RLIDTWGQKGdngneppg 236 Burkholderiales...

Feature 1                                                                                        
BAO29271     220 -GEGELFHPTNIALGPdGDIYVVETSNFRVQRFTAEGKPVRTYGSVGSalGSFARPKGIAMDKAGRLLVGDAAFQNVQIF 298 Sulfuritalea hy...
WP_009552636 221 -EPGQFNIPVQAAVAPdGTLWVLDAGNFRVQAFDPDGKYLRAFGNAGTgiGQFARPRGLACDGDGRLYVSDGSFGNVQVF 299 Burkholderiales...
WP_018989477 235 -GPGEFNLPRDMAIGKdGRLYVVDGGNFRVQIFDEDGTFHSSFGAVGRqlGNFARPKEIATDRDGNVYVADAAFGNFQIF 313 Azoarcus tolucl...
YP_007549670 236 -GPGEFNLPRDMAIGKdGRLYVVDGGNFRVQIFNADGSYRDSFGSVGRqlGNFARPKEIATDNEGNVYVADAAFGNFQIF 314 Azoarcus sp. KH32C
YP_007552151 274 -APGRVSIPLAATVTR-GSLLVLDSGNFRVQTFDLEGNFKGMFGSVGNgiGQFSRPRSISADQDGNIYVSDASFNNVQIF 351 Azoarcus sp. KH32C
YP_521544    219 dKEKSLHQPTNLAVGRdGDIYVVETGNFRVARFTPEGKFVRHYGEAGQapGQFARPKGIAMDRSGRMYVSDAAFQNVQIF 298 Rhodoferax ferr...
YP_589825    251 tEPGQFARPTNVAVDSdSNLYVTDTSNRRVEIFDADGQFITAWGKAGDgpGTFARPKGIAIDSDGHVWVADAAQDRVQCF 330 Candidatus Kori...
WP_018992348 237 -APGKLNMPLAATVTPsGTLLVLDSGNFRIQAFDLDGNYKLHFGSVGNglGQFSRPRSIATDHEGRIYVSDASFNNVQLF 315 Azoarcus tolucl...
YP_001793152 221 -GPGQFNLPRDMAIGRdGRLYVVDGGNFRVVVFDAEGRYLRSFGSVGKqyGQFARPKEVAIDRDGNVYVVDTAFGNFQIF 299 Leptothrix chol...
WP_009552664 237 gSHGDLNAPTHLTFSQ-GVLYVADTMNARIVAFDEAGVPQRQFGKRGLyvGNLVRPKGVAADDEGNVYVVESMHDNLLVF 315 Burkholderiales...

Feature 1                                                              
BAO29271     299 DNNGKlLMFFGQTDg---rADGLNLPAGVTVDy-ENIALFRRFaDPKFNIDYLI 348 Sulfuritalea hydrogenivorans sk43H
WP_009552636 300 NPQGElLIALGSGSrr-daPGRYGLPHGVAVDetGRVYVVDQL-FNKVEVLRRV 351 Burkholderiales bacterium JOSHI_001
WP_018989477 314 DPEGElLMFIGNRSeq-ggPAQYILPSGIAVDedGRVFFVDQW-FSKIDVFRPY 365 Azoarcus toluclasticus
YP_007549670 315 NADGElLMFIGNRSer-ggPAEYILPSGIAVDddGRIYFVDQW-FAKIDVFRPY 366 Azoarcus sp. KH32C
YP_007552151 352 SPAGElLMWLGEPSlr-nvPGQFGLIAGIAVDetGRLYVADQY-HLKVEVYRPE 403 Azoarcus sp. KH32C
YP_521544    299 DGQGRvLMAFGQPGg---dLPGLNLPAGVAIDy-DNVALFRSLaDPKFSIEHLI 348 Rhodoferax ferrireducens T118
YP_589825    331 SKDGKvLLYLGGHGl---lPGMFGNVAGLTIDkkNRVYTSDQN-PGRVQMFQYI 380 Candidatus Koribacter versatilis Ellin345
WP_018992348 316 SPTGDlLMWIGASGlr-dqPGQFGLIAGIAADetGRLYISDHY-HRKIEVYRPT 367 Azoarcus toluclasticus
YP_001793152 300 SPDGE-LLMFVGERserdsPARYMLPSGIAVDedGRVYVVDQW-FRKIDVFRPA 351 Leptothrix cholodnii SP-6
WP_009552664 316 DNQAQlLLSIGGTGs---dVGKFYLPAGVWVDgkNRVFVADMF-NGRVVVFQFL 365 Burkholderiales bacterium JOSHI_001

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap