Conserved Protein Domain Family
hnRNP-L_PTB

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TIGR01649: hnRNP-L_PTB 
hnRNP-L/PTB/hephaestus splicing factor family
Included in this family of heterogeneous ribonucleoproteins are PTB (polypyrimidine tract binding protein) and hnRNP-L. These proteins contain four RNA recognition motifs (rrm: pfam00067).
Statistics
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PSSM-Id: 273733
Aligned: 6 rows
Threshold Bit Score: 655.349
Created: 8-Oct-2014
Updated: 23-Jan-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAL14775 253 ASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHREL 332 fruit fly
P26599    57 PSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKEL 136 human
CAA85411 119 VSKVVHVRNIPPDLVDVELMQLCIQYGPVSNYMMLKGKSQAFVEYEEEASAAAFVSGMTAVPIQIRGRTLFAQYSTHREL 198 Caenorhabditis elegans
P14866   100 ASPVVHIRGLIDGVVEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVNYAADNQIYIAGHPAFVNYSTSQKI 179 human
AAH12849 197 VSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYSTSKRI 276 house mouse
AAL16320  30 PSIVVHVRNLHQKVTEADLLEALSNFGPVAYATCIPHSRMALVEFEDIEGAKACVNFATSNQINVGGQGALFNYSTSQCI 109 Caenorhabditis elegans
AAL14775 333 KTDQghNnstahsdySVqspasgsplplsaaanatsnnansssdsnsamgilqntsavnaggntNAAGGPNTVLRVIVES 412 fruit fly
P26599   137 KTDSspNqaraqaalQAvnsvqsgnlal--------------------------aasaaavdagMAMAGQSPVLRIIVEN 190 human
CAA85411 199 KFDKnk-------aiSDtesvangs---------------------------------vsnfevgTQQQPNSVLRTIIEN 238 Caenorhabditis elegans
P14866   180 SRPG--D--------SD------------------------------------------------DSRSVNSVLLFTILN 201 human
AAH12849 277 TRPG--N--------TD------------------------------------------------DPSGGNKVLLLSIQN 298 house mouse
AAL16320 110 ERMG------------------------------------------------------------FESATPNKVLVVTVLN 129 Caenorhabditis elegans
AAL14775 413 LMYPVSLDILHQIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTALNVKYNND 492 fruit fly
P26599   191 LFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNND 270 human
CAA85411 239 MMFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNND 318 Caenorhabditis elegans
P14866   202 PIYSITTDVLYTICNPCGPVQRIVIFRKNG-VQAMVEFDSVQSAQRAKASLNGADIYSGCCTLKIEYAKPTRLNVFKNDQ 280 human
AAH12849 299 PLYPITVDVLYTVCNPVGKVQRIVIFKRNG-IQAMVEFESVLCAQKAKAALNGADIYAGCCTLKIEYARPTRLNVIRNDN 377 house mouse
AAL16320 130 AQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADIYSGCCTLKVEFAKPDRVRVQRQDK 209 Caenorhabditis elegans
AAL14775 493 KSRDFTNPALPpGEPGVDIMPTAGGLMNtndllliaarqrpslsgdkivngLGAP------GVLPPFALGlgtpltg--- 563 fruit fly
P26599   271 KSRDYTRPDLPsGDSQPSLDQTMAAAFG-----------------------LSVPnv---hGALAPLAIP---------- 314 human
CAA85411 319 KSRDYTNPNLPaG--EMTLEQTIAMSIPglqnlipanp---ynfafganpaTTFLttqlaaSTAAAAAVNdsanaaa--- 390 Caenorhabditis elegans
P14866   281 DTWDYTNPNLS-GQGDPGSNPNKRQRQPpllgdhpa-------eyggphggYHSHyhdegyGPPPPHYEGrrmgppvggh 352 human
AAH12849 378 DSWDYTKPYL--GRRDRGKG---RQRQailgdhp----------ssfrhdgYGSH------GPLLPLPSRyrmg------ 430 house mouse
AAL16320 210 DQRDFTLPDN---RRPYEDDRNHYDRHDyqap---------------ssygYSSRg-----GGHSDYYGGdrggpph--- 263 Caenorhabditis elegans
AAL14775 564 gynnalpNLAAFSLANSgALQTTAPAmRGYSNVLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQ 643 fruit fly
P26599   315 -------SAAAAAAAAG-RIAIPGLA-GAGNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGN 385 human
CAA85411 391 -lapylnPLGLTSANLApSISSMRFPmINLTPVILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNKKDNALIQYSEPQ 469 Caenorhabditis elegans
P14866   353 rrgpsryGPQYGHPPPPpPPPEYGPHaDSP--VLMVYGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGY 430 human
AAH12849 431 ----srdTPELVAYPLPqASSSYMHGgSPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIEKVKFMKTIPGTALVEMGDEY 506 house mouse
AAL16320 264 -pppsryRDDYEDRGYA------QPAgGGPGCVMMIYGLEHGKINCDMLFNILCQYGNVLRISFMRTKTETGIIELGTPE 336 Caenorhabditis elegans
AAL14775 644 QAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPKE-GQPDAGLT--RDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIP 720 fruit fly
P26599   386 QAQLAMSHLNGHKLHGKPIRITLSKHQNVQLPRE-GQEDQGLT--KDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIP 462 human
CAA85411 470 QAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPKE-GQPDAGLT--RDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIP 546 Caenorhabditis elegans
P14866   431 AVDRAITHLNNNFMFGQKLNVCVSKQPAIMPGQS-YGLEDGSCsyKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAP 509 human
AAH12849 507 AVERAVTHLNNVKLFGKRLNVCVSKQHSVVPSQI-FELEDGTSsyKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVP 585 house mouse
AAL16320 337 ERQNVLDFLQGSALFGLTLEFKPSHQECVHHLRDpFLLPDGSPsfKDYSSSRNQRFSTPELAAKNRIIFPTNTLHWFNAP 416 Caenorhabditis elegans
AAL14775 721 SSCSEDDIKEAFTSNSF-EVKAFKFFPKD----RKMALLQLLSVEEAVLALIKMHNHQLSESN-----HLRVSFSKSNI 789 fruit fly
P26599   463 PSVSEEDLKVLFSSNGG-VVKGFKFFQKD----RKMALIQMGSVEEAVQALIDLHNHDLGENH-----HLRVSFSKSTI 531 human
CAA85411 547 TSVSEEKLKEMFAEAGF-AVKAFKFFPKD----HKMALCQLEDIETAIDALIAMHNHKLAENA-----HLRVSFSKSGI 615 Caenorhabditis elegans
P14866   510 LEVTEENFFEICDELGVkRPSSVKVFSGKse-rSSSGLLEWESKSDALETLGFLNHYQMKNPNgpypyTLKLCFSTAQH 587 human
AAH12849 586 LCVTEETFTKLCNDHEVlPFIKYKVFDAKasakTLSGLLEWKCKTDAVEALTALNHYQIRVPNgsnpyTLKLCFSTSSH 664 house mouse
AAL16320 417 GTMDEQALLDLMAEKTEhKPVKIDIFPSRne-rSAAGTAEFETVEIANEVLALVNHTPVNSPYgsapfIVKWAYATPRR 494 Caenorhabditis elegans
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