4CSU,1LNZ,1UDX


Conserved Protein Domain Family
Obg_CgtA

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TIGR02729: Obg_CgtA 
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Obg family GTPase CgtA
This model describes a univeral, mostly one-gene-per-genome GTP-binding protein that associates with ribosomal subunits and appears to play a role in ribosomal RNA maturation. This GTPase, related to the nucleolar protein Obg, is designated CgtA in bacteria. Mutations in this gene are pleiotropic, but it appears that effects on cellular functions such as chromosome partition may be secondary to the effect on ribosome structure. Recent work done in Vibrio cholerae shows an essential role in the stringent response, in which RelA-dependent ability to synthesize the alarmone ppGpp is required for deletion of this GTPase to be lethal. [Protein synthesis, Other]
Statistics
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PSSM-Id: 274271
Aligned: 110 rows
Threshold Bit Score: 362.125
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4CSU_9         3 FVDEASILVVAGDGGNGCVSFRREKYIPKggpdggdggdggdVWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKR 82  Escherichia col...
WP_011070279   3 LTDNAVIFVKGGNGGKGCVSFRREKYIPKggpdggnggnggnVWIYSDKNTHDLYHCLVRKNFIAEDGENGKKNNSSGKN 82  Wigglesworthia ...
WP_006688605   3 FIDKCKIVLIAGNGGDGIVSWRRETHVPEggpaggnggnggsIWFVGNHNETSLEFLKYKKIIRAKHGEKGDIKNQHGAN 82  Ureaplasma parvum
WP_009885945   3 ITDYCECRFTAGNGGNGIIAWKREAHYDKggpgggnggnggnVILQADHNCDSLFFLKNKKHLFAEDGQNGKPDLAHGKN 82  Mycoplasma geni...
WP_011183420   3 FIDTAKFTIKAGNGGNGAVSFHTALFVPNggpnggdggnggsVIFEADGGKHSLLDLKLQKQLSAQDGFKGDIKNMHGAQ 82  Mesoplasma florum
WP_011264942   3 FIDEVELELRGGKGGDGAISFRREAHVANggpdggdggkggdIYFRPNYGINTLLDLQFRKIIRAEDGENGKRKNQYGKG 82  Mycoplasma mobile
WP_011412905   3 FVDEAFNEVFAGNGGHGIVAFRREKYVAFggpaggnggnggsVIFVGDKGENTLLKLKYQKHLKAPHGINGKNKGQNGAN 82  Aster yellows w...
WP_011113699   3 FIDRCQIKLIAGNGGDGIIAWRREAHYDKggpaggsggkggnIILVADHNQSTLLSLKYSKIIRASNGDNGKPDLSSGQN 82  Mycoplasma gall...
WP_011091472   3 FLDKAIIHVIAGNGGHGRTSFRREKYIPKggpdggdggnggnVWLQTVTNLNTLIDFKFTKIFKAQDGQQGFNKKKTGKK 82  Buchnera aphidi...
WP_011053895   3 FIDQTIIQVIAGNGGNGCVNFRREKYIPKggpdggdggdggnVWLQSDNNLNTLIDLRFKKTFQAPHGENGSGKNCSGKK 82  Buchnera aphidi...
4CSU_9        83 GKDVTIKVPVGTRVIDq-GTG-ETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLA 160 Escherichia col...
WP_011070279  83 GKDVIIKVPIGTNIFFikNSEnIIFGHTRFHNQKFLVAKGGVRGLGNNYFKSPTNRTPMESTLGKLGESFKIKLDFVFLA 162 Wigglesworthia ...
WP_006688605  83 AEDVFINVPLGTVVYNp-ITN-EILADINIDQQKYLVAQGGLGGHGNTHFKSPFNKAPNLYELGELGENVEVLLELKTIA 160 Ureaplasma parvum
WP_009885945  83 GSDLLIKVPIGTTVKNl-ENN-SVLVDFVHDKQSFILCFGGKGGKGNAAFKSPIMRAPNLYENGDKGEILNVSLEVKYLA 160 Mycoplasma geni...
WP_011183420  83 GKDLIVRVPVGTLIIEn-KTG-TILADMDEDKKQVLVAKGGKGGKGNARFANSRNKAPTIFEAGEIGQFYEVKAELKVLA 160 Mesoplasma florum
WP_011264942  83 AEDTIIEVPFGTLVYEn-DK---LIEDIVEERDY-LIVKGGQGGRGNLKFKTPRNGAPFMNENGSFGEKKRLRLQLQILA 157 Mycoplasma mobile
WP_011412905  83 APHLYVKVPLGTVFYTa-DN--KFLGEILYDQQTLVIAKGGKGGKGNKALATFKNQAPSYSEKGDLGESFKIKTELKVLA 159 Aster yellows w...
WP_011113699  83 GMDKYVKVPIGTTVYDe-QTN-EVIVDLIRDKQEYIICHGGKGGRGNAAFKSSTLRAPNLYELGDEGEEKTVRLELKYLA 160 Mycoplasma gall...
WP_011091472  83 GSDIVIQIPIGTKIIDh-NTN-EIIEDMIQDKQLVLVAKGGWHGLGNTRFKSSTNRIPIKHTKGTQGEFRILRLELILIA 160 Buchnera aphidi...
WP_011053895  83 GSDIKIYVPVGTKIINy-QTR-EIIGDLIKHKQKILIAKGGWHGLGNTRFKSSINRTPRQRTLGSVGEKRDIQLELILIA 160 Buchnera aphidi...
4CSU_9       161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNeKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Escherichia col...
WP_011070279 163 DVGLFGYSNTGRSCFMRSISNVKPKISFYPFTTLFPYIGSLNFLN-KDIKFVDIPSFIEGKKKN-NLRNRFLKHLQNCRL 240 Wigglesworthia ...
WP_006688605 161 DIGIIGLPNAGKSTLISTFTNAKPKTANYMFTTLNPVLGTIYRDQ-NRIIFADIPGLIEGAHTGVGLGHDFLKHIERCFL 239 Ureaplasma parvum
WP_009885945 161 NVGIVGFPNSGKSTLISKLSNAKPKIANYRFTTLIPVLGVVKYQN-NSLVFADIPGLIENASEGSGLGHDFLRHIERCEI 239 Mycoplasma geni...
WP_011183420 161 DVGFVGLPNAGKSTLLRAISNSKPEVADYAFTTLNPQLGVSRAKDgSTFVVADLPGLIEGASLGKGLGHQFLKHIERCRV 240 Mesoplasma florum
WP_011264942 158 DIGLVGLPSAGKSTLLSVLSNAKPKIGDYDFTTLSPQLGLVKSSD-SSYTIADLPGLIKGASEGKGLGIQFLKHIERCRV 236 Mycoplasma mobile
WP_011412905 160 DIGLLGFPSVGKSSLISAISKAQPKVASYPFTTIKPHLGVVEVDG-FSFVVADLPGLIENAHLGCGMGIQFLKHIERCRV 238 Aster yellows w...
WP_011113699 161 NVGIVGYPNAGKSTLISKLSNAKPKIANYQFTTLVPILGIVENND-KRLVFADIPGLIENASEGYGLGHDFLRHVERCEV 239 Mycoplasma gall...
WP_011091472 161 HVGTLGLPNSGKSTLVRNISNAKTKIANYPFTTLKPVLGTVKINHkEFFVIADIPGLIQGASHGIGLGYQFLKHLERCHL 240 Buchnera aphidi...
WP_011053895 161 DVGTLGMPNAGKSTLVKSISGAKTKIANYPFTTLNPVLGSVNTEG-KKFIIADIPGIMQNASQGFGLGVRFLKHLERCKI 239 Buchnera aphidi...
4CSU_9       241 LLHLIDIDPIDGT-DPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDK-VEAEEKAKAIAEAL--GWedKYYLISAA 316 Escherichia col...
WP_011070279 241 LLHFINLDVKNVK-KTINKEKINIKILKSFRN-LFLKPIWLIINKTDININsNIFFKQAQFVSNSLgyEK--KFFFISLN 316 Wigglesworthia ...
WP_006688605 240 LIHLISLDPNDNP-DIINAYETIVNELKQYKQNLVNKPIVLVANKIDQIGAlENLQILKEYLKNNQ------EIKIISAL 312 Ureaplasma parvum
WP_009885945 240 LIHLISLDPVDND-DPCKAYLQIMDELSKYSPLLVKKKMLVVANKIDVNEg-EKRFKKLEKFLQKK--SI--SVLKISAL 313 Mycoplasma geni...
WP_011183420 241 ICHVLDMSGNYGQeDVIKNYELIRSELVKYNYKLDERPEIIVANKMDTDE--AQLNMMEEDIKKYFk-DK--KVVFVSGL 315 Mesoplasma florum
WP_011264942 237 IAHIIDFGSKDK--NPINAYEQILEELRLYDETLLERTQLIIANKEDL----EDFETNLNLFRKKFp-KL--EIFQISAL 307 Mycoplasma mobile
WP_011412905 239 LVHILSMESS----NPYQDFQTLNQELKQYNPQLLLKKQIIVTNKMDLPDSlKKLTLLKQKIK-----GQ--PIIPLSLV 307 Aster yellows w...
WP_011113699 240 LIHLISMNPLDHD-DVIDAYEKIMTELRKYSQLLVNKKMLVVANKMDVEGAsENFNKLRSYLAKK---GI--DISSISAI 313 Mycoplasma gall...
WP_011091472 241 LLHIIDISQINFK-NTITNIHVILDELKTYNKILHNKPIWFVFNKIDLIDd-IDINTKLKSILEKLgsIQ--QYFLISAI 316 Buchnera aphidi...
WP_011053895 240 LLHIVDLCPTDHS-NPVENIRIILNELKKYNTSLYNKPRWLILNKIDLIKs-SEIKKIIDKIKNFLkvEE--RFYLISSI 315 Buchnera aphidi...
4CSU_9       317 SGLGVKDLCWDVMTFI 332 Escherichia coli str. K-12 substr. DH10B
WP_011070279 317 DFISIKILINKILLFL 332 Wigglesworthia glossinidia
WP_006688605 313 TNLHVDNMLDDVIKIY 328 Ureaplasma parvum
WP_009885945 314 -KKELGNLLDRVFELY 328 Mycoplasma genitalium
WP_011183420 316 LKDNVDELLLKIAKEL 331 Mesoplasma florum
WP_011264942 308 TTKNVNGLKNKLGEIL 323 Mycoplasma mobile
WP_011412905 308 SFDNLEILKYKMSSFL 323 Aster yellows witches'-broom phytoplasma
WP_011113699 314 -NGDVNNLVDRVFDLY 328 Mycoplasma gallisepticum
WP_011091472 317 KKTGLKKIVKKIYDFL 332 Buchnera aphidicola
WP_011053895 316 KKIGVKKLCSDIAFYL 331 Buchnera aphidicola
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