1PMA,3H4P,1J2Q


Conserved Protein Domain Family
arc_protsome_B

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TIGR03634: arc_protsome_B 
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proteasome endopeptidase complex, archaeal, beta subunit
This protein family describes the archaeal proteasome beta subunit, homologous to both the alpha subunit and to the alpha and beta subunits of eukaryotic proteasome subunits. This family is universal in the first 29 complete archaeal genomes but occasionally is duplicated. [Protein fate, Degradation of proteins, peptides, and glycopeptides]
Statistics
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PSSM-Id: 274690
Aligned: 27 rows
Threshold Bit Score: 246.737
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1PMA_B         8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAV 87  Thermoplasma ac...
WP_010867872  10 GTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKAL 89  Pyrococcus abyssi
WP_011250380   7 GTTTVGIVCKDGVVLAADRRASLGNMVLSERVTKVFQIDDHLAIAGAGTVGDILSLVRLLRAEAKLYRAKVSREMSVKAL 86  Thermococcus ko...
WP_011251157   6 GTTTVGIRTKEGVVLAADTQASLDHMVETLNIRKILPITDRIAITTAGSVGDVQALARMLEAEARYYQFTWGRPMTAKAM 85  Thermococcus ko...
WP_010978284   5 PATALGIKLNDGIILAAERRLSYGGFVLSRSAKKVFKIG-RFGIAGAGIMGDIQTLTRLMNVEIKYYEMYNNKPISVKAA 83  Sulfolobus toko...
WP_009990557   5 PATAVGLKVNDGIVLASERRLSYGGYVLSKQAKKVYKIN-KFLMAGAGIYGDLQTLTRIMNVEIKYYEVSTGKPISVHAA 83  Sulfolobus solf...
WP_011277548   5 PATAIGIKTKDGVVLAAERRLSYGDFVLSKSARKVFKLG-RFGIAGAGIVGDIQTLTRIMNVEIKYYEMYNSRKISARAA 83  Sulfolobus acid...
Q9UXF3        14 GTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVLKNIYHYNSITKYGPISIKGI 93  Sulfolobus solf...
WP_011009495   8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKILKLNAKAYELEMKRKPSTHSM 87  Pyrobaculum aer...
WP_010865799   5 GATALGIRVEDGVVLAADKRMSYGGFILSRNFKKIFVINDRIGIAFAGLYGDMGGLVRIVEGQMRLASLETGKPATVRNV 84  Aeropyrum pernix
1PMA_B        88 ATLLSNMLNQVKYMPYMVQLLVGGID-TA-PHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIR 165 Thermoplasma ac...
WP_010867872  90 ATLLANMLNGARMLPYLAWFLVGGFDeK--PRLYSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVE 167 Pyrococcus abyssi
WP_011250380  87 ATLTSNILHSGRGFAYMAWFLVGGYDs-A-PRLYSIDAAGGVTEDRFTAAGSGMEFAFSVLEENYRDGIPLEEGVKLALR 164 Thermococcus ko...
WP_011251157  86 AHLLSNILNENKWFPYMVQIIIGGYVeE--PTLANLDPLGGLIFDDYTATGSGSPFAIAVLEDGFRKDMSLEEAKELAVR 163 Thermococcus ko...
WP_010978284  84 AKLLSVILYQYKWTPFISELLFGGVDdEG-PKLFVLDPIGSLIEDNYAAVGSGARVAIGVLESEYDPSMNLDKGKEIVLK 162 Sulfolobus toko...
WP_009990557  84 AKLLSVILYQYKVMPFISEILFGGVDeKG-PQLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMSLDVATQLITK 162 Sulfolobus solf...
WP_011277548  84 AKLLSVILYQNKVLPYISELLFGGVDeDG-PKLFILDPIGSLIEDSYAAVGSGARVAIGVLEAEYNESLTSEAAKELAIK 162 Sulfolobus acid...
Q9UXF3        94 ATRLANVLSATKYFPYIVQILIGGYD-DQ-PRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKR 171 Sulfolobus solf...
WP_011009495  88 ARLLSVIMFSRRFMPFFAEVLVGGIDeEG-PHLIVMDPLGSLIEDNYAALGTGAKLAVAVLDTGYRPDITVEEAKKLAVQ 166 Pyrobaculum aer...
WP_010865799  85 AKFLSSLLYSYKFFPFNVEAIVGGIDpGGePKLYVLDPLGSIIEEDYVAAGTGATTAFGLLEHVYKRGMSLEEAKKAAVE 164 Aeropyrum pernix
1PMA_B       166 AISAAKQRDSASGG-MIDVAVITrKDGY 192 Thermoplasma acidophilum
WP_010867872 168 AINSAIKRDVFSGD-GIMVVTIT-EEGY 193 Pyrococcus abyssi
WP_011250380 165 AIKAATKRDVFTGG-GVTLVTIT-EEGY 190 Thermococcus kodakarensis
WP_011251157 164 AVRTAGKRDVYTGDrKVQVVVIS-KDGM 190 Thermococcus kodakarensis
WP_010978284 163 ALKAAIERDVTSGD-GIDILTIK-RDNt 188 Sulfolobus tokodaii
WP_009990557 163 AIKASIERDITSGD-GIDLAIID-KKGn 188 Sulfolobus solfataricus
WP_011277548 163 SMKSAVERDVMSGD-GIDILIIN-KNNI 188 Sulfolobus acidocaldarius
Q9UXF3       172 AVFSAIKRDSFTGT-GVIVAKIH-SKGH 197 Sulfolobus solfataricus P2
WP_011009495 167 ALKAAIERDPVSGG-GIDLAIVD-KNGa 192 Pyrobaculum aerophilum
WP_010865799 165 ALRASMARDAGTGD-GIDVLVLP-VSGk 190 Aeropyrum pernix
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