3J5S


Conserved Protein Domain Family
ABC_ABC_ChvD

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TIGR03719: ABC_ABC_ChvD 
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ATP-binding cassette protein, ChvD family
Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Statistics
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PSSM-Id: 274744
Aligned: 32 rows
Threshold Bit Score: 933.967
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3J5S_D         8 AQFVYTMHRVGKVVPp-KRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQL 86  Escherichia col...
WP_011413574   3 AQYAYVMKNMTKSFPgaQKPVLTNINLQFYQGAKIGIVGPNGAGKSTLMKIMAGIDTDFSGEAWPGENITVGYLPQEPQL 82  Erythrobacter l...
WP_011646237   4 PQIVYHMQGLTKAYPg-GKKVFENIHLNFLPDAKIGVVGVNGSGKSTLLRIMAGVDKDFSGEAWAAEGIKVGYLPQEPKL 82  Hyphomonas nept...
WP_010920009   3 QQYIFQMQGLTKAYPg-GKKVFENIWLSFYSDAKIGVVGVNGSGKSTLLKVMAGLDKEFSGEAKAADGIKRGYLPQEPVL 81  Caulobacter vib...
WP_011456744   4 YQYVYHMDGVSKTYPg-GKKCFENIRLSFLPGVKIGVVGVNGAGKSTLMKIMAGLDKDFTGEAWSAEGARVGYLPQEPQL 82  Jannaschia sp. ...
KGJ67095      34 RQFIYFMQGLTKSYP--TRKVLDNIHLSFYPDAKIGVLGVNGSGKSTLLKIMAGLDKEYNGEAWVAQGARVGYLEQEPQL 111 Bradyrhizobium ...
EFG38368      50 RQFIYHMSGLNKAYG--NKKILENIHLSFYPDAKIGILGPNGAGKSTVLKIMAGLDKEYTGEAWLAEGATCGYLPQEPEL 127 Brucella sp. NV...
WP_011550691   3 QNFIFTMQDLRKVKN--GKEILKGIYLSFFPGAKIGVIGPNGSGKSTLLRIMAGVDTEFFGVAKPDPSAKVGYLAQEPQL 80  Myxococcus xanthus
WP_011389280   4 YQYVYVMKNLSKVYPg-GKEILKGLSLSFLPGAKIGVLGPNGAGKSTVLRIMAGIDKEFGGEAWAADGVKIGYLAQEPDL 82  Rhodospirillum ...
WP_011102553   2 SEYIYSMVRARKKVG--DRLILDDVTMAFLPGAKIGMVGPNGAGKSTILRIMAGLDSPSNGEALLSPGYTVGILLQDPEL 79  Tropheryma whip...
3J5S_D        87 NPEHTVRESIEEAVSEVVNALKRLDEVYALYADP--DADF-DKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWD 163 Escherichia col...
WP_011413574  83 DESKTVLENVKDGARHIADKVDEYNSIAAQMAEP--DADF-EVLGEKMAELQTEIDAVDGWTLDNQLEIAMEALRCPPGD 159 Erythrobacter l...
WP_011646237  83 DPKLTAFENVAASCPE-KQMLDKFNEISAKLGED-----YtDELMEEMTKLQEQIDAADAWDIDSKIEMAMNALRCPDND 156 Hyphomonas nept...
WP_010920009  82 DPTLDVWGNVIADCED-KQIFDRYNALAAQLGEE-----YtDELMEEMTKLQEVIDARDLWDIDSKVEMAIDALRCPPND 155 Caulobacter vib...
WP_011456744  83 DETLTVRENVMLGVAEKKGKLDRFNELAMNYSDE---------TADEMAALQDDIDANNLWDLDSQIDVAMEALRCPPDD 153 Jannaschia sp. ...
KGJ67095     112 DAKLSVRENVMLGVAKQKAILDRYNELAMNYSEE--TAD-------EMTKLQDEIEAQGLWDLDSKVDQAMDALRCPPDD 182 Bradyrhizobium ...
EFG38368     128 DPSKDVLGNVMEGVADKKAIIDRYNELMMNYSDE--TAD-------EGAKLQDIIDSQNLWDLESQVEMAMEALRCPPGD 198 Brucella sp. NV...
WP_011550691  81 DASLDVKGNVELGLKEIRATLDRFNEVSAKFAEPmsDAEM-EKLLAEQGRLQDAIDAVNGWELDRTIEMAMDALRLPPGD 159 Myxococcus xanthus
WP_011389280  83 DPAKDVMGNVMDGVGPMKALLDRFEEVSAKFGEVvdDDEM-NALIAEQAEIQEKIDAADGWDLQRQVEIAMDALRCPPGE 161 Rhodospirillum ...
WP_011102553  80 DDSATVLENVQMGLGSIRHDLDRFNQISALLTDP--SEDY-DALLTEMGTLQERIDTAKAWDIDSRLSQAMHALRCPEPD 156 Tropheryma whip...
3J5S_D       164 AKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEG 243 Escherichia col...
WP_011413574 160 WPVNDLSGGEKRRVALTRLLIQKPSILLLDEPTNHLDAESVEWLENHLKEYAGAVLMITHDRYFLDNVVGWILELDRGTY 239 Erythrobacter l...
WP_011646237 157 ADVTTLSGGEVRRVAICQLLLSKPDMILMDEPTNHLDAETVAWLQNYLINFPGCVILVTHDRYFLDDITSWILELDRGRG 236 Hyphomonas nept...
WP_010920009 156 ANIESLSGGEKRRIALARLLLSKPDMLLLDEPTNHLDAESVAWLQHHLEEFPGCVILVTHDRYFLDQVTKWTLELDRGKG 235 Caulobacter vib...
WP_011456744 154 APVETLSGGERRRVALCKLLLEAPEMLLLDEPTNHLDAETIAWLQQHLIDYKGTILIVTHDRYFLDDITGWILELDRGRG 233 Jannaschia sp. ...
KGJ67095     183 ADVTKLSGGERRRVALCRLLLDQPELLLLDEPTNHLDAESVSWLEGHLRNYPGAILIVTHDRYFLDNVTSWILELDRGKG 262 Bradyrhizobium ...
EFG38368     199 ADVTKLSGGEKRRVALCKLLLSKPDLLLLDEPTNHLDAETTAWLEKHLREYPGSVLIITHDRYFLDNVTGWILELDRGRG 278 Brucella sp. NV...
WP_011550691 160 ADVTKLSGGEKRRVALCRILLEKPDLLLLDEPTNHLDAESVAWLEQALKEYKGTIVCITHDRYFLDNAAEWILELDRGEG 239 Myxococcus xanthus
WP_011389280 162 ADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVGWLEHFLQQYPGTVVAITHDRYFLDNAANWILEVDRGRG 241 Rhodospirillum ...
WP_011102553 157 QKAAHLSGGERRRVALCALLLTAPDLLLLDEPTNHLDAESVLWLEQHLARYQGAVIAVTHDRYFLDNVAQWIAEVDRGHL 236 Tropheryma whip...
3J5S_D       244 IPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEEL-NSTEYQKRNETN-ELFIPP 321 Escherichia col...
WP_011413574 240 YPYEGNYSTYLEKKAKRLEQESREESGKQKALARELEWIRQTPAARQTKSKARIRKFDQL-QEAQSDRKPGKA-QIVIQV 317 Erythrobacter l...
WP_011646237 237 VPFQGNYSGWVEQKAKRMEQEARDDVGRKRTLAKELEWVRSGQKARQAKSKARITAYEKM-ASEAEREKVMTA-QIRIPP 314 Hyphomonas nept...
WP_010920009 236 VPYEGNYSGWLEQKQKRVVQEQSESEARQRALTRELEWVRSSPKARQSKSKARLASYEEMvAAQENARAAQTQaHIQIPP 315 Caulobacter vib...
WP_011456744 234 IPYEGNYSAWLEQKAKRLEQEAREDKSRQKTLERELEWIRQGAKARQAKQKARINAYEDL-AGKSEREKLSRA-TIIIPN 311 Jannaschia sp. ...
KGJ67095     263 IPYEGNYSSWLVQKQKRLEQEGREDAAHQKTIAREQEWVASSPKARQAKSKARYQRYEEL-LKQASEKQTQTA-QIIIPV 340 Bradyrhizobium ...
EFG38368     279 IPYEGNYSAYLEAKAKRMAQEGREEAAREKALSREREWISASPKARQAKSKARIKAYDEL-VKSAEERRPGDA-QIIIPV 356 Brucella sp. NV...
WP_011550691 240 VPWKGNYSSWLEQKQKRLELEEKSESHRQKTLKRELEWVRASPKARQAKSKARIAAYEEL-LNQTQDKRDATG-EVIIPP 317 Myxococcus xanthus
WP_011389280 242 IPYEGNYSTYLENKQKRLEQESREEGARDKTISRELEWIRQSPKARQAKSKARITAYENL-VASAGSQKVESA-QIVIPI 319 Rhodospirillum ...
WP_011102553 237 YPYEGNYTTYLEKKRDRLKIQGKKDEKLARRLNNEIEWVRSSPKGRQAKSRARLVRYETMlESAQKTGKTNFD-EIQIPP 315 Tropheryma whip...
3J5S_D       322 GPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVDQFR 401 Escherichia col...
WP_011413574 318 PERLGGKVIEAKNLTKAYGDKLLFEDLSFTLPPGGIVGVIGPNGAGKSTLFRIITGQEEPDSGKLEIGDTVRLGYVDQSR 397 Erythrobacter l...
WP_011646237 315 GPRLGGVVLEAENLGKAFGDNVLIENLDFKLPPGGIVGVIGPNGAGKSTLFKMILGQEKPDTGALRVGETVKIGYVDQSR 394 Hyphomonas nept...
WP_010920009 316 GPRLGNLVLEVNGLEKEYGDKVLFKDLSFRLPPNGIVGVIGPNGAGKSTLFKLITGREQPDAGTVKVGETVKLSYVDQSR 395 Caulobacter vib...
WP_011456744 312 GQRLGGKVIEINNLKKGYGDKLLIEDLTFALPPGGIVGVIGPNGAGKSTFFRMLTGQEKPDAGTLEYGDTVDLAYVDQSR 391 Jannaschia sp. ...
KGJ67095     341 AERLGANVVDFEGLSKGYGDRLLIDDLTFKLPPGGIVGVIGANGAGKTTLFKMITKQETPDKGTITVGETVHLGYVDQSR 420 Bradyrhizobium ...
EFG38368     357 GERLGQVVIEVENLSKGFGDRLLIDDLSFKLPAGGIVGVIGPNGAGKSTLFKMLTGQEQPDKGSVRIGDTVHLSYVDQSR 436 Brucella sp. NV...
WP_011550691 318 GPQLGGLVVEAKGLRKAYGDRLLIEDLNFKLPRGGIVGVIGPNGAGKTTLFRMMTGVEKPDEGELNIGETVKLAYVDQSR 397 Myxococcus xanthus
WP_011389280 320 AERLGGVVIEAEGLTKGFGDRLLIDDLTFRLPPGGIVGVIGANGAGKTTLFKMITGKDQPDSGAIRIGETVRLGYVDQSR 399 Rhodospirillum ...
WP_011102553 316 GPRLGDKVLEVEDLTKLFGSRVVINRLTFSLPRNGVIGVVGPNGVGKTTLFRILAGEEKDYSGRVSFGDSVVVSYVDQTR 395 Tropheryma whip...
3J5S_D       402 DSMDNSKTVWEEVSGGLDIMKIGNT-EMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTND 480 Escherichia col...
WP_011413574 398 DDLTASNNVWEEISDGLDYMKVNGH-DMSTRAYVGAFNFKGADQQKNVGKLSGGERNRVHMAKMLKEGGNVLLLDEPTND 476 Erythrobacter l...
WP_011646237 395 DKLDPNKNVWEEISGGTDLIDLGGV-SVMSRAYVGAFNFKGTDQQKKVGILSGGERNRVHLAKMLRGSHNLLLLDEPTND 473 Hyphomonas nept...
WP_010920009 396 DALDPNKTIWEEISGGTDVMIVGKR-EINSRAYVGSFNFKGGDQQKKVGLLSGGERNRVHLAKTLATGGNLLLLDEPTND 474 Caulobacter vib...
WP_011456744 392 DALAGDTTVWEEISGGAEIIELGDA-TMNSRAYCSAFNFKGGDQQKKVGQLSGGERNRVHMAKLLKSGGNVLLLDEPTND 470 Jannaschia sp. ...
KGJ67095     421 DALDGNKNVWEEISGGNELILLGKK-EVNSRGYCSSFNFKGADQQKKVGALSGGERNRVHLAKMLKSGANVLLLDEPTND 499 Bradyrhizobium ...
EFG38368     437 DALDPNKTVWEEISGGNDVIKLGKF-EMNSRAYCGAFNFKGGDQQQKVGNLSGGQRNRVHLAKMLKSGGNVLLLDEPTND 515 Brucella sp. NV...
WP_011550691 398 DALDGDNSVFQEVSGGLDHLDLGKAgQVPSRAYLAGFAFKGQDQQKRVKDLSGGERNRVHLAKMLKSGGNLLLLDEPTND 477 Myxococcus xanthus
WP_011389280 400 DALDPNKTVWQEISDGQDELDLGKR-KIPSRAYVGQFNFKGSDQQKKVGQLSGGERNRVHLAKMLKSHANVLLLDEPTND 478 Rhodospirillum ...
WP_011102553 396 SGIDPTRNVWQVVSNGLDYMEVGKV-EIPTRAYISRFGFKGSDQQKLAKVLSGGELNRLNLALTLKQGGNLLLLDEPTND 474 Tropheryma whip...
3J5S_D       481 LDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDE----GKVEFFEGNFTEYEEYKKRTLGADALEPkRIKY 556 Escherichia col...
WP_011413574 477 LDVETLGALEEAIENFAGCAVVISHDRFFLDRLATHILAFEGN----SHVEWFEGNFEAYEEDKRRRLGDAADRPtRLAY 552 Erythrobacter l...
WP_011646237 474 LDVETLQALEEGLDNFPGCAVIISHDRWFLDRMATHILAFEGD----SHVEWFEGDFSSYLEDKKRRLGEDAVNPkRLKF 549 Hyphomonas nept...
WP_010920009 475 LDIETLQALEEALEEFAGCAVVISHDRWFLDRLATHILAFEGD----SHVEWFEGNFEMYEEDKKRRLGADSLIPkRIKF 550 Caulobacter vib...
WP_011456744 471 LDVETLRALEDALTDFAGCAVVISHDRFFLDRICTHILAFEGE----AHVEWFEGDFSAYEEDKKRRLGPDALEPkRLKH 546 Jannaschia sp. ...
KGJ67095     500 LDVDTLRALEEALEDFAGCAVIISHDRWFLDRIATHILAFEGD----SHVEWFEGNFQDYEKDKMRRLGQDSIIPhRVKY 575 Bradyrhizobium ...
EFG38368     516 LDTETLGALEDALENFAGCAVIISHDRMFLDRLATHILAFEGD----SHVEWFEGNFEDYEADKIRRLGPDSVNPkRVTY 591 Brucella sp. NV...
WP_011550691 478 LDVETLRSLEDALLGFAGCAVVISHDRWFLDRIATHILAFEGD----SKAFFFEGNFEDYEADKKKRLGPEALEPhRIRY 553 Myxococcus xanthus
WP_011389280 479 LDVETLRALEDALLEFAGCAVVISHDRWFLDRIATHILSFEGD----SHVEWFEGNFEAYEADKKRRLGADADQPhRLKY 554 Rhodospirillum ...
WP_011102553 475 LDVETLSSLESALDAFPGCAFVITHDRYFLDRVSTHILAYEGTpeypGEWRWFEGNFQGYIDDRLSRLGPDSAGVhR--- 551 Tropheryma whip...
3J5S_D       557 KRI 559 Escherichia coli str. K-12 substr. MG1655
WP_011413574 553 KKL 555 Erythrobacter litoralis
WP_011646237 550 KKF 552 Hyphomonas neptunium
WP_010920009 551 QKF 553 Caulobacter vibrioides
WP_011456744 547 KKF 549 Jannaschia sp. CCS1
KGJ67095     576 KKL 578 Bradyrhizobium diazoefficiens SEMIA 5080
EFG38368     592 KPL 594 Brucella sp. NVSL 07-0026
WP_011550691 554 RPI 556 Myxococcus xanthus
WP_011389280 555 KPL 557 Rhodospirillum rubrum
WP_011102553 552 -QL 553 Tropheryma whipplei
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