4Q6F


Conserved Protein Domain Family
PHD_BAZ2A

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cd15629: PHD_BAZ2A 
Click on image for an interactive view with Cn3D
PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
BAZ2A, also termed transcription termination factor I-interacting protein 5 (TTF-I-interacting protein 5, or Tip5), or WALp3, is an epigenetic regulator. It has been implicated in epigenetic rRNA gene silencing, as the large subunit of the SNF2h-containing chromatin-remodeling complex NoRC that induces nucleosome sliding in an ATP- and histone H4 tail-dependent fashion. BAZ2A has also been shown to be broadly overexpressed in prostate cancer, to regulate numerous protein-coding genes and to cooperate with EZH2 (enhancer of zeste homolog 2) to maintain epigenetic silencing at genes repressed in prostate cancer metastasis. Its overexpression is tightly associated with a prostate cancer subtype displaying CpG island methylator phenotype (CIMP) in tumors and with prostate cancer recurrence in patients. It contains a TAM (TIP5/ARBP/MBD) domain, a DDT domain, four AT-hooks, BAZ 1 and BAZ 2 motifs, a WAKZ (WSTF/Acf1/KIAA0314/ZK783.4) motif, a plant homeodomain (PHD) finger, and a bromodomain.
Statistics
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PSSM-Id: 277099
Aligned: 3 rows
Threshold Bit Score: 81.051
Created: 21-Mar-2014
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding siteH3 histone
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C H C C CClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1       #  #           #  #    #  #              #  # 
4Q6F_A       8 TCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMeaVPEGDWFCTVCL 54   human
B7ZS37    1478 TCLYCRKGDNDELLLLCDSCDRGCHTYCHRPRMneIPEGDWFCPTCI 1524 African clawed frog
AHI87501   297 TCQVCRKGDDDEYLLLCDGCDRGCHMFCLRPKVlqVPDGDWFCPNCV 343  common carp

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