4GND


Conserved Protein Domain Family
PHD5_NSD3

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cd15661: PHD5_NSD3 
Click on image for an interactive view with Cn3D
PHD finger 5 found in nuclear SET domain-containing protein 3 (NSD3)
NSD3, also termed histone-lysine N-methyltransferase NSD3, or protein whistle, or WHSC1-like 1 isoform 9 with methyltransferase activity to lysine, or Wolf-Hirschhorn syndrome candidate 1-like protein 1 (WHSC1-like protein 1, or WHSC1L1), is a lysine methyltransferase encoded by gene NSD3, which is amplified in human breast cancer cell lines. Moreover, translocation resulting in NUP98 fusion to NSD3 leads to the development of acute myeloid leukemia. NSD3 contains a catalytic suppressor of variegation, enhancer of zeste and trithorax (SET) domain, two proline-tryptophan-tryptophan-prolin motif (PWWP) domains, five plant-homeodomain (PHD) zinc fingers, and an NSD-specific Cys-His rich domain (Cys5HisCysHis). The SET domain is responsible for histone methyltransferase activity. The PWWP and PHD fingers are involved in protein-protein interactions. This model corresponds to the fifth PHD finger.
Statistics
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PSSM-Id: 277131
Aligned: 5 rows
Threshold Bit Score: 84.2483
Created: 13-Aug-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding siteputative
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C H C C HClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #        #    #    #  #            #  #
4GND_A         17 YCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWH 59   human
XP_005155379 1437 YCYCCGEGGELVMCDKKDCPKAYHLLCLNLSKPPYGRWECPWH 1479 zebrafish
EMC81514     1326 NCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPFGKWECPWH 1368 rock pigeon
XP_001232891 1322 NCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPFGKWECPWH 1364 chicken
XP_006000427 1349 YCFHCGDGGELVMCDKKDCPKAYHLLCLNLTKPPVGRWECPWH 1391 coelacanth

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