Conserved Protein Domain Family
SNARE_syntaxin4

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cd15883: SNARE_syntaxin4 
SNARE motif of syntaxin 4
Syntaxin-4 forms a complex with SNAP-23 (Qb/Qc) and R-SNAREs VAMP8, VAMP2 and VAMP7 which plays a role in exocytosis of secetory granule. Syntaxin 4 is member of the Qa subgroup of SNARE (soluble N-ethylmaleimide-sensitive factor attachment protein receptor) proteins, which consist of coiled-coil helices (called SNARE motifs) that mediate the interactions between SNARE proteins, and a transmembrane domain. The SNARE complexes mediate membrane fusion, important for trafficking of newly synthesized proteins, recycling of pre-existing proteins and organelle formation. SNARE proteins are classified into four groups, Qa-, Qb-, Qc- and R-SNAREs, depending on whether the residue in the hydrophilic center layer of the four-helical bundle is a glutamine (Q) or arginine (R). Qa-, as well as Qb- and Qc-SNAREs, are localized to target organelle membranes, while R-SNARE is localized to vesicle membranes. They form unique complexes consisting of one member of each subgroup, that mediate fusion between a specific type of vesicles and their target organelle.
Statistics
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PSSM-Id: 277236
Aligned: 3 rows
Threshold Bit Score: 99.2514
Created: 5-Apr-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
heterotetramerzero layer
Feature 1:heterotetramer interface [polypeptide binding site]
Evidence:
  • Comment:based on homology to other members of the family

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             # ## ###### ### ## ### ## ### ## ###### ###### ###### ### 
NP_001089849 197 ALNEIEARHEEIMKLEKSIVELHDMFMYLAMEVEAQGETIDNIEKNIMRSNDYVEKAREQLSQ 259 African clawed frog
3041737      199 ALNEISARHSEIQQLERSIRELHDIFTFLATEVEMQGEMINRIEKNILSSADYVERGQEHVKT 261 human
NP_956515    200 ALNEIESRHDEIIKLERSIKELHDMFQYLAMEVEAQGEMVDRIESNIKMSHDYVEKAVAETEA 262 zebrafish

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