1RN7,1DVC,1EQK,2W9P,1A67


Conserved Protein Domain Family
Cystatin

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pfam00031: Cystatin (this model, PSSM-Id:278460 is obsolete and has been replaced by 394988)
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Cystatin domain
Very diverse family. Attempts to define separate sub-families failed. Typically, either the N-terminal or C-terminal end is very divergent. But splitting into two domains would make very short families. pfam00666 is related to this family but members have not been included.
Statistics
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PSSM-Id: 278460
View PSSM: pfam00031
Aligned: 35 rows
Threshold Bit Score: 55.4011
Threshold Setting Gi: 118187
Created: 11-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1RN7_A  12 GGIHATDL--NDKSVQRALDFAISEYNKVInkdEYYSRPLQVMAAYQQIVGGVNYYFNVKFGRTTCTkSQPNLDNCPFNd 89  human
P35174  10 GGLSEARP--ATSEIQEIADKVRPLLEEKT---NEKYEKFKAIEYKVQVVQGLNYFIKMNVGRGCYL-HINVLSGISS-- 81  house mouse
P01039  10 GGVSEAKP--ATPEIQEVADKVKRQLEEKT---NEKYEKFKVVEYKSQVVAGQILFMKVDVGNGRFL-HMKVLRGLSG-- 81  Norway rat
P35175   4 GGVSEASR--ATPEIQMIANKVRPQLEAKT---NKKYEKFEAVEYKTQVVAGENIFIKMDVGHGCFI-HIKVFNGPTG-- 75  house mouse
P35173  10 GGLSEARP--ATPEIQMIADKVRPLLEEQT---NEKYEKFEAVEYKSQVVAGQNLFIKIDVGNGCFL-HMKVFRGLSG-- 81  house mouse
1EQK_A  10 GGVEPVGNe-NDLHLVDLARFAVTEHNKKA---NSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGd---AKKLYEAKVWE- 81  Japanese rice
P31726  42 GGIKDVPAneNDLQLQELARFAVNEHNQKA---NALLGFEKLVKAKTQVVAGTMYYLTIEVKD--GE-VKKLYEAKVWE- 114 Zea mays
P37842   5 GGLVDVPFe-NKVEFDDLARFAVQDYNQKN---DSSLEFKKVLNVKQQIVAGIMYYITFEATEG-G--NKKEYEAKILL- 76  potato
P37842 288 GGIINVPNp-NSPEFQDLARFAVQDYNNTQ---NAHLEFVENLNVKEQLVSGMMYYITLAATDA-G--NKKEYEAKIWV- 359 potato
2W9P_F   1 -GIVNVPNp-NNTKFQELARFAIQDYNKKQ---NAHLEFVENLNVKEQVVAGIMYYITLAATDD-AG-KKKIYKAKIWV- 72  potato
1RN7_A  90 qpkLKEEEFCSFQINEVPW 108 human
P35174  82 ---ENDLELTGYQTNKAKN 97  house mouse
P01039  82 ---DDDLKLLDYQTNKTKN 97  Norway rat
P35175  76 ---KDNYELHGYQTDKTMD 91  house mouse
P35173  82 ---EDDLKLKGYQTNKTKT 97  house mouse
1EQK_A  82 ---KPWMDFKELQEFKPVD 97  Japanese rice
P31726 115 ---KPWENFKQLQEFKPVE 130 Zea mays
P37842  77 ---RKWEDLKKVVGFKLVG 92  potato
P37842 360 ---KEWEDFKKVIDFKLVG 375 potato
2W9P_F  73 ---KEWEDFKKVVEFKLV- 87  potato
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