3M0C,3M0C,3M0C,3M0C


Conserved Protein Domain Family
Ldl_recept_b
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pfam00058: Ldl_recept_b (this model, PSSM-Id:278487 is obsolete and has been replaced by 459654)
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Low-density lipoprotein receptor repeat class B
This domain is also known as the YWTD motif after the most conserved region of the repeat. The YWTD repeat is found in multiple tandem repeats and has been predicted to form a beta-propeller structure.
Links
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Statistics
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PSSM-Id: 278487
Aligned: 23 rows
Threshold Bit Score: 45.2379
Created: 18-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
3M0C_C  526 GFMYWTDWGTPa--KIKKGGLNG-VD--IYSLVTEN----IQWPNGITLD 566  human
P35950  616 DKVFWTDVINEa--IFSANRLTG-SD---VNLVAEN----LLSPEDIVLF 655  Chinese hamster
P98157 2338 NLMFWTNWNEQh-pSIMRATLSG-AN--VLIIIDQD----IRTPNGLAID 2379 chicken
Q04833 3445 GYLFFTEWSLQp--YIGRIALDG-SPelQDPIFKLAeh-dLGWPNAIAID 3490 Caenorhabditis elegans
P35953  481 QKLFWADVSQK---AIFSASIDD-KVg-RHVKMIDN----VYNPAAIAVD 521  rabbit
P35950  440 NRIYWSDLSQGkiySALMDQAPT-LS--YDTIISGD----LQAPDGLAVD 482  Chinese hamster
P01130  439 NRIYWSDLSQRmicSTQLDRAHG-VSs-YDTVISRD----IQAPDGLAVD 482  human
Q04833 4227 ELMYWIDGSERtiyRSAIANGNQ-SH--EGQKLDVDfaamGVVPTAIAVD 4273 Caenorhabditis elegans
3M0C_C  436 NRIYWSDLSQRmicSTQLDRAHGvSS--YDTVISRD----IQAPDGLAVD 479  human
3M0C_C  613 DKVFWTDIINEa--IFSANRLTG-SD--V-NLLAEN----LLSPEDMVLF 652  human
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