1CYD,3BZU,1HDC,4CR8,2RH4,4N5L,1EDO,1GEG


Conserved Protein Domain Family
adh_short

?
pfam00106: adh_short (this model, PSSM-Id:278532 is obsolete and has been replaced by 395056)
Click on image for an interactive view with Cn3D
short chain dehydrogenase
This family contains a wide variety of dehydrogenases.
Statistics
?
PSSM-Id: 278532
View PSSM: pfam00106
Aligned: 47 rows
Threshold Bit Score: 156.997
Threshold Setting Gi: 662702118
Created: 10-Jun-2015
Updated: 5-Aug-2015
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1CYD_D         8 LRALVTGAGKGIGRDTVKALHASGAKVVAv-tRTNSDLvslAKECPG--------IEPVCVDLG-DWDATEKALGGI--- 74  house mouse
P37059        83 KAVLVTGGDCGLGHALCKYLDELGFTVFAgvlNENGPG---AEELRRtcs---prLSVLQMDIT-KPVQIKDAYSKVaam 155 human
P80365        83 RAVLITGCDSGFGKETAKKLDSMGFTVLAtvlELNSPG---AIELRTccs---prLRLLQMDLT-KPGDISRVLEFTkah 155 human
P21898         7 NIIFVAGLG-GIGLDTSREIVKSGPKNLVvldRIDNPAa--IAELKAlnp--kvtITFYPYDVTvPLAETKKLLKTIfd- 80  Drosophila hete...
O16091         7 KHVCYVADCGGIALETSKVLMTKNIAKLAilqSVENPPa--IAQLQSikh--stqIFFWTFDVTmAREEMKKYFDEVmv- 81  Drosophila pers...
AJR47431       3 KVILVTGVSRGIGKSIVDVLFSLDKDTVV---YGVARSeapLKKLKEkyg---drFFYVVGDIT-EDSVLKQLVNAAvk- 74  Saccharomyces c...
WP_041054160   6 NTVLITGGSAGIGLELAKRLLELGNEVIIc-gRSEARLaeaKQQLPN--------IHTKQCDVA-DRSQREALYEWAlk- 74  Bacillus subtilis
XP_005266734  33 AHVVVTGGSSGIGKCIAIECYKQGAFITLv-aRNEDKLlqaKKEIEMhsindkqvVLCISVDVSqDYNQVENVIKQAqe- 110 human
NP_012142     10 KIAVVTGASGGIGYEVTKELARNGYLVYAc-aRRLEPMaqlAIQFGNd------sIKPYKLDIS-KPEEIVTFSGFLran 81  Saccharomyces c...
WP_005693935   4 TTALVTGATAGFGLAICKKLIEAGYKVIGt-gRRADRLaeiHSQLGNn-------FLPLAFDIR-DEQATINALNTLpe- 73  Haemophilus inf...
1CYD_D        75 ---GPVDLLVNNAAL-VIMQPFLEVTKEA-FDRS------FSVNLRSVFQVSQMVARDmi--nRGVPGSIVNVSSMVAHV 141 house mouse
P37059       156 lqdRGLWAVINNAGV-LGFPTDGELLLMTdYKQC------MAVNFFGTVEVTKTFLPLl----RKSKGRLVNVSSMGGGA 224 human
P80365       156 ttsTGLWGLVNNAGH-NEVVADAELSPVAtFRSC------MEVNFFGALELTKGLLPLl----RSSRGRIVTVGSPAGDM 224 human
P21898        81 -klKTVDLLINGAGI---------LDDTQ-IERT------IAVNFTGTVNTTTAIMDFwdkrkGGPGGVVANICSVTGFN 143 Drosophila hete...
O16091        82 -qmDYIDVLINGATL----------CDERnIDAT------INTNLTGMMNTVATVLPYmdrkmGGSGGLIVNVTSVIGLD 144 Drosophila pers...
AJR47431      75 -ghGKIDSLVANAGVlEPVQNVNEIDVNA-WKKL------YDINFFSIVSLVGIALPEl----KKTNGNVVFVSSDACNM 142 Saccharomyces c...
WP_041054160  75 -eyPNLNVLVNNAGI------QKEIDFKKgTEELfvdgdeIELNFQAPVHLSALFTPHl---mKQPEAAIVQVTSGLAFN 144 Bacillus subtilis
XP_005266734 111 -klGPVDMLVNCAGM-AVSGKFEDLEVST-FERL------MSINYLGSVYPSRAVITTm---kERRVGRIVFVSSQAGQL 178 human
NP_012142     82 lpdGKLDLLYNNAGQ-SCTFPALDATDAA-VEQC------FKVNVFGHINMCRELSEFl----iKAKGTIVFTGSLAGVV 149 Saccharomyces c...
WP_005693935  74 -gwQAVDLLVNNAGLaLGLEPAHKADLQD-WYQM------IDTNIKGLVTITRLVLPNm---vARNYGQIINLSSIAGTY 142 Haemophilus inf...
1CYD_D       142 TFPNLITYSSTKGAMTMLTKAMAMELGPHK--IRVNSVNPTVVL-TDMGKKVSADPE 195 house mouse
P37059       225 PMERLASYGSSKAAVTMFSSVMRLELSKWG--IKVASIQPGGFL-TNIAGTSDKWEK 278 human
P80365       225 PYPCLGAYGTSKAAVALLMDTFSCELLPWG--VKVSIIQPGCFK-TESVRNVGQWEK 278 human
P21898       144 SIYQVPVYSASKAAALSFTTSLAKLAHITG--VTVYSINPGITK-TVLVHKFNSWLN 197 Drosophila heteroneura
O16091       145 PSPVFCAYSASKFGVIGFTRSLADPLYYTQngVAVMAVCCGPTK-VFVDRELTAFLA 200 Drosophila persimilis
AJR47431     143 YFSSWGAYGSSKAALNHFAMTLANEERQ----VKAIAVAPGIVD-TDMQVNIRENVG 194 Saccharomyces cerevisiae YJM1355
WP_041054160 145 PLAVYPVYCATKAALHSFSLTLRHQLRDTS--VEVIEMAPPMVD-TGLNQKSRDKQG 198 Bacillus subtilis
XP_005266734 179 GLFGFTAYSASKFAIRGLAEALQMEVKPYN--VYITVAYPPDTD-TPGFAEENRTKP 232 human
NP_012142    150 SFPFGSIYSASKAAIHQYARGLHLEMKPFN--VRVINAITGGVA-TDIA----DKRP 199 Saccharomyces cerevisiae S288c
WP_005693935 143 PYAGSNVYGGTKAFVTQFSLNLRADLAGTK--IRVSNVEPGLCGgTEFSNVRFHGDD 197 Haemophilus influenzae
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap