3VJ6,1K8D,3E6H,2D31,3AM8,1NEZ,1ZAG,1I1A


Conserved Protein Domain Family
MHC_I

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pfam00129: MHC_I (this model, PSSM-Id:278555 is obsolete and has been replaced by 395078)
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Class I Histocompatibility antigen, domains alpha 1 and 2
Statistics
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PSSM-Id: 278555
Aligned: 17 rows
Threshold Bit Score: 238.832
Created: 11-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3VJ6_A   1 SPHSLRYFTTAVSRPGLGEPRFIIVGYVDDTQFVRFDSDAENPRMEPRARWIEQEG-PEYWERETWKARDMGRNFRVNLR 79  house mouse
P16215  22 GSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDSDAAIPRMEPREPWVEQEG-PQYWERTTGYAKANAQTDRVALR 100 chimpanzee
P13752  22 GSHSLRYFSTAVSRPGLGEPRYLEVGYVDDTQFVQFDSDAPNPRMEPRARWVEQEG-PEYWDRNTRNAKGNAQSFRVNLN 100 cattle
P15978  25 GSHSLRYFHTAVSRPGLGEPRFISVGYVDDTQFVRYDSDAENPRYEPRARWMEREG-PEYWEEQTLVAKGQELDYRVSLR 103 Norway rat
1K8D_A   1 GQHSLQYFHTAVSRPGLGEPWFISVGYVDDTQFVRFDSDAENPRMEPRARWMEQEG-PEYWERETQIAKGHEQSFRGSLR 79  house mouse
P01898  25 GSHSMRYFETSVSRPGLGEPRFIIVGYVDDTQFVRFDSDAETPRMEPRAPWMEQEG-PEYWERETQRAKGNEQSFHVSLR 103 house mouse
3E6H_A   1 mSHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEG-PEYWERETRRAKGNEQSFRVDLR 79  house mouse
1NEZ_A   1 GSHSLRYFYTALSRPAISEPWYIAVGYLDDTQFARFDSAGETGTYKLSAPWVEQEG-PEYWARETEIVTSNAQFFRENLQ 79  house mouse
P15979  23 ELHTLRYIQTAMTDPGPGQPWFVTVGYVDGELFVHYNSTAR--RYVPRTEWIAAKAdQQYWDGQTQIGQGNEQIDRENLG 100 chicken
1ZAG_A   2 GRYSLTYIYTGLSKHVEDVPAFQALGSLNDLQFFRYNSKDR--KSQPMGLWRQVEG-MEDWKQDSQLQKAREDIFMETLK 78  human
3VJ6_A  80 TLLGYYNQSNDESHTLQWMYGCDVGPDGRLLRGYCQEAYDGQDYISLNEDLRSWTANDIASQISKHKSEAVDEAHQ-QRA 158 house mouse
P16215 101 NLLRRYNQSEAGSHTLQGMNGCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEE-FRT 179 chimpanzee
P13752 101 TLRGYYNQSEAGSHTLQWMSGCDVGPDGALRRGFMQYGYDGRDYLALNEDLRSWTAGETEAQITKRKWEAAGYAEV-QRN 179 cattle
P15978 104 NLLSYYNQSEGGSHTIQRMYGCDVGSDGSLLRGYEQHAYDGRDYIALNEDLKTWAVADFAAWITRSKWQRNGAAER-SRA 182 Norway rat
1K8D_A  80 TAQSYYNQSKGGSHTLQWMYGCDMGSDGRLLRGYLQFAYEGRDYIALNEDLKTWTAVDMAAQITRRKWEQAGIAEK-DQA 158 house mouse
P01898 104 TLLGYYNQSESGSHTIQWMYGCKVGSDGRFLRGYLQYAYDGRDYIALNEDLKTWTAADVAAIITRRKWEQAGAAEY-YRA 182 house mouse
3E6H_A  80 TALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAGAAER-DRA 158 house mouse
1NEZ_A  80 TMLDYYNLSQNGSHTIQVMYGCEVEFFGSLFRAYEQHGYDGQDYIALNEDLKTWTAADMAAEITRSKWEQAGYTEL-RRT 158 house mouse
P15979 101 ILQRRYNQT-GGSHTVQWMYGCDILEGG-PIRGYYQMAYDGRDFTAFDKGTMTFTAAVPEAVPTKRKWEEESEPER-WKN 177 chicken
1ZAG_A  79 DIVEYYNDS-NGSHVLQGRFGCEIENNR-SSGAFWKYYYDGKDYIEFNKEIPAWVPFDPAAQITKQKWEAEPVYVQrAKA 156 human
3VJ6_A 159 YLQGPCVEWLHRYLRLGNETL 179 house mouse
P16215 180 YLEGECLELLRRYLENGKETL 200 chimpanzee
P13752 180 YLEGECVEWLRRYLENGKDTL 200 cattle
P15978 183 YLEGTCVEWLLRYLERGKETL 203 Norway rat
1K8D_A 159 YLEGTCMQSLRRYLELGKETL 179 house mouse
P01898 183 YLEAECVEWLLRYLELGKETL 203 house mouse
3E6H_A 159 YLEGECVEWLRRYLKNGNATL 179 house mouse
1NEZ_A 159 YLEGPCKDSLLRYLENRKKTQ 179 house mouse
P15979 178 YLEETCVEWLRRYVEYGKAEL 198 chicken
1ZAG_A 157 YLEEECPATLRKYLKYSKNIL 177 human
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