4K95


Conserved Protein Domain Family
IBR

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pfam01485: IBR (this model, PSSM-Id:279784 is obsolete and has been replaced by 460227)
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IBR domain, a half RING-finger domain
The IBR (In Between Ring fingers) domain is often found to occur between pairs of ring fingers (pfam00097). This domain has also been called the C6HC domain and DRIL (for double RING finger linked) domain. Proteins that contain two Ring fingers and an IBR domain (these proteins are also termed RBR family proteins) are thought to exist in all eukaryotic organizms. RBR family members play roles in protein quality control and can indirectly regulate transcription. Evidence suggests that RBR proteins are often parts of cullin-containing ubiquitin ligase complexes. The ubiquitin ligase Parkin is an RBR family protein whose mutations are involved in forms of familial Parkinson's disease.
Statistics
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PSSM-Id: 279784
Aligned: 162 rows
Threshold Bit Score: 31.739
Created: 9-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4K95_A       318 NRYQQYGAEECVLQ-MGGVL-CPRP-GCGAGL---------LPEQG---QRKv-----tCEGgnglgCGFVFCRDCK-EA 376 Norway rat
Q23FV5       184 QDYKRNLGRVYCSE-SKTMKwCPAP-GCDFAV---------ENTHF---THQyv----qCIq-----CNTSFCFKCG-KE 239 Tetrahymena the...
Q4Z6J6         3 KQYKQLLLNVYIKK-SSNLRnCPNY-ECEYTIesmllikhtKNSNNfdkYKNln---iiCK------CGYNFCFICL-EP 70  Plasmodium berghei
Q585X6       200 KRAQQRFLTEYLSN-HPSMRcCPNElPCEGIV---------RVAVPrrsGPDv-----cCAR-----CDLQFCFKCT-GK 258 Trypanosoma brucei
A0BTN9       136 KVYQQSYLLRLSKDyRITVKcC-NNqDCEYYI---------QNKPL---ENIv-----eCL------CGTIFCVKCE-QG 190 Paramecium tetr...
XP_001580830 190 DNLVNYLTDLQISI-SSDLRqCPNP-RCAKPLs--------VVGCGaryCNIm-----kCSY-----CNTEFCIKCF-GL 248 Trichomonas vag...
XP_001324861 264 ESYTNFLIESQISE-NPNLKhCINP-RCQKIL----------TSNAigyCLVa-----eCE------CGARMCWRCG-EI 319 Trichomonas vag...
XP_572912    212 DRYYNLLNAAFVSD-SPNLRwCPHP-DCPYII---------GCTQApqrMLNqlvptveCE------CGKDLCFGCGyAA 274 Cryptococcus ne...
XP_001305692 174 KKLEERISSLSASM-SKTVRrCINP-KCNLLV---------SMSHI---FKgkm---avCS------CGYYTCFECG-KE 229 Trichomonas vag...
XP_001420513 136 TKFDTFLRRSFLEN-NAKLRpCIGV-DCECAI---------AVEQLptnPVSv-----kCN------CGAEFCFSCQ-SE 192 Ostreococcus lu...
4K95_A       377 YHEG 380 Norway rat
Q23FV5       240 HHSP 243 Tetrahymena thermophila SB210
Q4Z6J6        71 FHRP 74  Plasmodium berghei
Q585X6       259 PHAP 262 Trypanosoma brucei
A0BTN9       191 DHRL 194 Paramecium tetraurelia
XP_001580830 249 CHAP 252 Trichomonas vaginalis G3
XP_001324861 320 AHDP 323 Trichomonas vaginalis G3
XP_572912    275 SHRP 278 Cryptococcus neoformans var. neoformans JEC21
XP_001305692 230 GHSP 233 Trichomonas vaginalis G3
XP_001420513 193 PHVP 196 Ostreococcus lucimarinus CCE9901
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