Conserved Protein Domain Family
OEP
?
pfam02321: OEP (this model, PSSM-Id:280481 is obsolete and has been replaced by 396757)
Outer membrane efflux protein
The OEP family (Outer membrane efflux protein) form trimeric channels that allow export of a variety of substrates in Gram negative bacteria. Each member of this family is composed of two repeats. The trimeric channel is composed of a 12 stranded all beta sheet barrel that spans the outer membrane, and a long all helical barrel that spans the periplasm.
Links
?
Statistics
?
PSSM-Id: 280481
Aligned: 113 rows
Threshold Bit Score: 46.7357
Created: 12-Jul-2015
Updated: 5-Aug-2015
Structure
?
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
Q63TE6        55 LDRLVERAAQDNLDVQAAVLRIAEA-RAQVRAAAAQ-G-LPDVRASASYQREQLGLKGFLEDGGVDAqlerlgapgsple 131 Burkholderia ps...
Q7V6Z5       301 LQETLKNALKQREEILASLAAAESAqWRGIASIRSY---LPVFQLMGTGSLNSSNGYSSVPVDDDPGsayhwt------- 370 Prochlorococcus...
Q3A2P2       291 LSEGYAEALAKRPDVQRRLRTIERL-ELQSRIARNE-L-LPALDLAASYGHKGLGRDYSDNLRDLGSndfr--------- 358 Pelobacter carb...
WP_039897061 320 IDIMQQLALENRPDYLKAKLDVERS-NFELQVAENNrRwNIDLTTDASRELAPDIVEDRTEVR----------------- 381 Lyngbya sp. PCC...
WP_041391312 236 LEESILSAYSFQKEIEKLILKVSIN-NNQANSALAA-I-QPKLSIFNTYTTSFAKGEVAVADPDTGNevfs--------- 303 Prochlorococcus...
WP_000291495 327 EKDYI-YALDHRTDLKNLRKQREIA-ELNLKIKEAE-D-MPSLKLSGAYSTRGQNIVSPQQNLTDGNrgvasf------- 395 Leptospira inte...
EAP96021     229 QRTIMDQALKLNNDLLVAKKNVERS-RRSLKESGSN-F-LPTVSLSASYRHDDANNYDKTDITATGEsns---------- 295 Vibrio splendid...
WP_002848683 231 LNLSPYENIFANLDYKQSEISTQIAtEEKNKRMTGV---LPTVDFSVGFSNSDYKDDARFGDEDNKVe------------ 295 Campylobacter f...
WP_004598570 236 LDEFTRKAAKFNPDINSARHNVTVTkALEMVQKGKL---LPQVSVKLLSGGTNYNPQEPVIQNINNRiy----------- 301 Rickettsia prow...
WP_021177400 167 LSFFVASTLNSYPALKTLENQVQIS-KENTKLQIAK-F-LPQVSFFGSYIMKQNNSVFEDMIPSWF-------------- 229 Helicobacter py...

Q63TE6       132 riapgagaalrrgaehtldqltspvnlwqAGFDASWELDLf-GRVRRSVEAAGAQTQAAIEGRNDALLSLEAEVAQTYLQ 210 Burkholderia ps...
Q7V6Z5       371 -----------------------rtwtatVGIGFSWSLFDg-GINAANAESFYAQSRQQKAQAAQTELTVVRQVRSSFAE 426 Prochlorococcus...
Q3A2P2       359 --------------------------nweVGLTLSYPLGN--REARHEYRRSEFERKGREAQLGQLKNQVHTEVQAAIRL 410 Pelobacter carb...
WP_039897061 382 -----------------------------AGIELSKTLGD--RNIEREFKRRQVDLVQAKNELDEEFQQITIEVQNRIRE 430 Lyngbya sp. PCC...
WP_041391312 304 -------------------------esntIGLQFDWKVFDg-GYGKSIYKSKKEKSKELEFDIELKKKQIREEIEESFFN 357 Prochlorococcus...
WP_000291495 396 -----------------------kypeayAAFQFSYPLWD--KGIKADIRNAKLDVQNLEKKEAELKLSIKEELENRYAA 450 Leptospira inte...
EAP96021     296 ---------------------------tsVGLNLAVPILSg-GSDYYGYQKSSTAIERTELLYQDSLYTTRNSVNTSVLN 347 Vibrio splendid...
WP_002848683 296 -----------------------------TMIRFTMPLFKs-GLTIERIQEGELLKMSSMSKQLDMQKKVAIEQKQAISD 345 Campylobacter f...
WP_004598570 302 ----------------------------tTTLSVNIPIYPegGAQYSRIRSAKNQTRNSVVQLDSAIKQIKAGVVSVWEG 353 Rickettsia prow...
WP_021177400 230 -----------------------------VGVAGRMPILSp-TGRIQKYQASKLAELQVNSEQIQAKKNMELLVNKTYKE 279 Helicobacter py...

Q63TE6       211 LRGAQALRTLAVALADEQRDVVALTRDQARKGLSSEl--D-VQSADARLAQLRAQLPQFDQQIALLRNGLSYLLG 282 Burkholderia pseudom...
Q7V6Z5       427 MQTSRVAIASAQRAYESAKLAQEVARVRWAAGVGDI---TsVVQTIQQLSIAAQQSSQAILSYNNAVAEIYRYSA 498 Prochlorococcus mari...
Q3A2P2       411 LGVSRKKIDVSASQLAFAEEKLRTLLKRKEVGLATT---RqVLEGEEDYALAQTDQAAALSDYNKAVTEYYKVTG 482 Pelobacter carbinoli...
WP_039897061 431 VDNNLRQVQLAQRATQLAEEQFSNEQEKIQLGAGDVsivD-LVRFQEDLGRARNRELNARISYINSITELHQVVG 504 Lyngbya sp. PCC 8106
WP_041391312 358 LEIAKQNISNTYNEIISARESLRLALLRLKAGITTQr--E-VVTNQRDLTQAEVNYIIAITDYNSNLVNLRRETG 429 Prochlorococcus marinus
WP_000291495 451 IVADKDIFEGAKKRKEEANKFYKGLSERFRQGRFTAv--A-VKNALDNVIQSELQVTQAKIQLNIDILRYELAKN 522 Leptospira interrogans
EAP96021     348 INDFSQSISSFENIIRANYASYKGIQRAYQLGTRTIt--D-LLAAESKLFSALRDYESARYDYIIETIKLEQIKG 419 Vibrio splendidus 12B01
WP_002848683 346 FRNYLQEANIVRNSLEHARVYEQAIERGYEEGLKNIv--D-LLDARARVYKTKADALNAGYQLILGYLNLEYLIG 417 Campylobacter fetus
WP_004598570 354 FETAKSRIVAANQGVEAAQISYNGIVQEEIVGSKTIl--D-VLDAEQKLYEAKITRVDAYKNSVLASYQMKLLTG 425 Rickettsia prowazekii
WP_021177400 280 TLSYLKEYKSLLSSVELAKENLKLQEQAFLQGLSTN---AqVIDARNTLSSIIVEQKSVAYKYIVSLANLMALSD 351 Helicobacter pylori
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap