1M6V,2VQD,2GPW,5DOU


Conserved Protein Domain Family
CPSase_L_D2

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pfam02786: CPSase_L_D2 (this model, PSSM-Id:280881 is obsolete and has been replaced by 397079)
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Carbamoyl-phosphate synthase L chain, ATP binding domain
Carbamoyl-phosphate synthase catalyzes the ATP-dependent synthesis of carbamyl-phosphate from glutamine or ammonia and bicarbonate. This important enzyme initiates both the urea cycle and the biosynthesis of arginine and/or pyrimidines. The carbamoyl-phosphate synthase (CPS) enzyme in prokaryotes is a heterodimer of a small and large chain. The small chain promotes the hydrolysis of glutamine to ammonia, which is used by the large chain to synthesize carbamoyl phosphate. See pfam00988. The small chain has a GATase domain in the carboxyl terminus. See pfam00117. The ATP binding domain (this one) has an ATP-grasp fold.
Statistics
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PSSM-Id: 280881
Aligned: 16 rows
Threshold Bit Score: 266.093
Created: 17-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1M6V_C        128 DRRRFDVAMKKIGLETARSGIA--HTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSP----T 201  Escherichia coli
P18185        128 DREKFRSLMNELKQPVPESEIV--DNEADALHFAESIGFPVIIRPAYTLGGKGGGIAPDKEAFTAMIKQALLASP----I 201  Bacillus subt...
Q5L0U3        128 DREQFRALMNELGEPVPESAII--HSLEEAYAFVEQIGYPVIVRPAFTLGGTGGGICTNEEELVEIVSTGLKMSP----V 201  Geobacillus k...
P11154        135 DKVSARNLAAKANVPTVPGTPGpiETVEEALDFVNEYGYPVIIKAAFGGGGRGMRVVREGDDVADAFQRATSEARtafgN 214  Saccharomyces...
P46392        122 DKVTARHIAARAQAPLVPGTPDpvKNADEVVAFAKEHGVPIAIKAAFGGGGKGMKVARTLEEISELYESAVREATvafgR 201  Mycobacterium...
P03965        149 DRDLFASALKDINIPIAESFAC--ETVDEALEAAERVKYPVIVRSAYALGGLGSGFANNASEMKELAAQSLSLA------ 220  Saccharomyces...
Q09794        593 DRELFARAMDEINEKCAKSASA--SSIEEAIKVSKDISFPVIVRAAYALGGLGSGFADNEAELIDLCTLAFATS------ 664  Schizosacchar...
P20054        525 DRGIFAEKLSEINERIAPSMAC--NSLEESLIEAEKIGYPVIVRAAYCLGGLGSGFADNKEQLTALVTEAMATS------ 596  Dictyostelium...
AAH53097      562 DRRAFAARMAEIGEHVAPSEAA--NSLEQAQAAAERLGYPVLVRAAFALGGLGSGFASTKEELSALVAPAFAHT------ 633  house mouse
XP_014180050  196 DRDLFVQALNEIDIPAAQSTAv--STIQDALDAAATIGYPIILRSAFSLGGLGSGFAHNEEELRNLAAKSLSLS------ 267  Trichosporon ...
1M6V_C        202 KELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMgiHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGG 281  Escherichia coli
P18185        202 NQCLVEKSIAGFKEIEYEVMRDSNNTCITVCNMENIDPVgvHTGDSIVVAPSQTLTDEDYQMLRTASLTIISALDVVGGC 281  Bacillus subt...
Q5L0U3        202 HQCLLERSIAGYKEIEYEVMRDANDNAIVVCNMENIDPVgiHTGDSIVVAPSQTLSDREYQLLRNASLKIIRALGIEGGC 281  Geobacillus k...
P11154        215 GTCFVERFLDKPKHIEVQLLADNHGNVVHLFERDCSVQR--RHQKVVEVAPAKTLPREVRDAILTDAVKLAKECGYRNAG 292  Saccharomyces...
P46392        202 GECFVERYLDKPRHVEAQVIADQHGNIVVAGTRDCSLQR--RFQKLVEEAPAPFLTDAQRKEIHESAKRICKEAHYYGAG 279  Mycobacterium...
P03965        221 PQILVEKSLKGWKEVEYEVVRDRVGNCITVCNMENFDPLgvHTGDSMVFAPSQTLSDEEFHMLRSAAIKIIRHLGVIGEC 300  Saccharomyces...
Q09794        665 PQVLIERSMKGWKEIEYEVVRDAFDNCITVCNMENFDPLgiHTGDSIVVAPSQTLTDEDYNMLRTTAVNVIRHLGVVGEC 744  Schizosacchar...
P20054        597 SQVLVEKSLKGWKEIEYEVLRDSKDNCITVCNMENFDPLgiHTGESIVVAPSQTLSDREYQMLRETAIKTVRHLGVIGEC 676  Dictyostelium...
AAH53097      634 SQVLIDKSLKGWKEIEYEVVRDAYGNCVTVCNMENLDPLgiHTGESIVVAPSQTLNDREYQLLRRTAIKVTQHLGIVGEC 713  house mouse
XP_014180050  268 PQVLIEKSLKGWKEVEYEVVRDAADNTIICCNMENFDPLgtHTGDSIVVAPSQTLTDDEYHMLRSAAIKIVRHVGVVGEC 347  Trichosporon ...
1M6V_C        282 sNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLD 333  Escherichia coli
P18185        282 -NIQFALDPFSKQYYVIEVNPRVSRSSALASKATGYPIAKMAAKLAVGYTLD 332  Bacillus subtilis subsp. subtilis str. 168
Q5L0U3        282 -NVQLALDPDSFRYYVIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLD 332  Geobacillus kaustophilus
P11154        293 -TAEFLVDN-QNRHYFIEINPRIQVEHTITEEITGIDIVAAQIQIAAGASLP 342  Saccharomyces cerevisiae S288c
P46392        280 -TVEYLVGQ-DGLISFLEVNTRLQVEHPVTEETTGIDLVLQQFKIANGEKLE 329  Mycobacterium leprae TN
P03965        301 -NVQYALQPDGLDYRVIEVNARLSRSSALASKATGYPLAYTAAKIGLGYTLP 351  Saccharomyces cerevisiae S288c
Q09794        745 -NIQYALNPFTKEYCIIEVNARLSRSSALASKATGYPLAFTAAKLGLNIPLN 795  Schizosaccharomyces pombe 972h-
P20054        677 -NIQYSLNPYSEEYCIIEVNARLSRSSALASKATGYPLAFISAKVALGYDLA 727  Dictyostelium discoideum
AAH53097      714 -NVQYALNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLALGIPLP 764  house mouse
XP_014180050  348 -NVQYALDPVSRDYRVIEMNARLSRSSALASKATGYPLAYTAAKIALGHTLP 398  Trichosporon asahii var. asahii CBS 2479
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