1QLE


Conserved Protein Domain Family
COX2_TM

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pfam02790: COX2_TM (this model, PSSM-Id:280885 is obsolete and has been replaced by 397083)
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Cytochrome C oxidase subunit II, transmembrane domain
The N-terminal domain of cytochrome C oxidase contains two transmembrane alpha-helices.
Statistics
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PSSM-Id: 280885
Aligned: 12 rows
Threshold Bit Score: 86.6096
Threshold Setting Gi: 117013
Created: 16-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1QLE_B        13 PVNGGMN---FQPASSPLAHDQQWLDHFVLYIITAVTIFVCLLLLICIVRFNRRANPVPARFT-HNTP-IEVIWTLVPVL 87  Paracoccus deni...
P21534        12 PSSWALY---FQDGASPSYLGVTHLNDYLMFYLTFIFIGVIYAICKAVIEYNYNSHPIAAKYTtHGSI-VEFIWTLIPAL 87  Schizosaccharom...
P43373        18 PTPYGIY---FQDSATPNQEGILELHDNIMFYLFIILGLVSWMLFTIVKTY--SKNPMAYKYIkHGQT-IEIIWTMFPAV 91  Candida glabrat...
P00411        15 PSPWGIY---FQDSATPQMEGLVELHDNIMYYLVVILFGVGWILLSIIRNYISTKSPISHKYLnHGTL-IELIWTITPAV 90  Neurospora cras...
P93285        17 AEPWQLG---FQDAATPIMQGIIDLHHDIFFFLILILVFVLWILVRALWHFHYKKNAIPQR-IvHGTT-IEILWTIFPSI 91  thale cress
P34840         2 ATWANLG---LQDSSSPLMEQLNFFHDHTLLILTMITILVGYIMGMLSFN------KFTNRFLlHGQT-IEIIWTVLPAI 71  African malaria...
P18944         2 ANHSQLG---FQDASSPIMEELVEFHDHALMVALAICSLVLYLLTLMLME------KLS-SNTvDAQE-VELIWTILPAI 70  chicken
O78750         2 AYPMQLG---FQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTT------KLTHTSTmDAQE-VETIWTILPAI 71  sheep
P15545         2 GTWAQFG---LQDASSPLMEELTYFHDYALIVLTLITILVFYGLVSLLVS------SNTNRFFfEGQE-LETIWTVIPAL 71  purple sea urchin
WP_036756866  42 PVNGGMN---FQPASSPLAHDQQWLDHFVLYIITAVTIFVCLLLLICIVRFNRRANPVPAR-FtHNTP-IEVIWTLVPVL 116 Paracoccus vers...
YP_006303585  15 PTPWGIF---FQDSASPQMEGIEELHNNIMFYLAIILFTVTWMMITIIRNFVAKKSPIAHKYMnHGTL-IELIWTITPAF 90  Aspergillus nid...
Q06474        20 SLWYGQNhglMPVAASADAEKVDGIFNYMMTIATGLFLLVEGVLVYCLIRFRRRKDDQTDGPPiEGNVpLEILWTAIPTV 99  Synechocystis s...
1QLE_B        88 ILVAIGAFSLPI 99  Paracoccus denitrificans
P21534        88 ILILVALPSFKL 99  Schizosaccharomyces pombe 972h-
P43373        92 ILLIIAFPSFIL 103 Candida glabrata CBS 138
P00411        91 ILILIAFPSFKL 102 Neurospora crassa OR74A
P93285        92 ILMFIAIPSFAL 103 thale cress
P34840        72 ILMFIAFPSLRL 83  African malaria mosquito
P18944        71 VLVLLALPSLQI 82  chicken
O78750        72 ILIMIALPSLRI 83  sheep
P15545        72 ILILIALPSLQL 83  purple sea urchin
WP_036756866 117 ILVAIGAFSLPI 128 Paracoccus versutus
YP_006303585  91 ILILIAFPSFKL 102 Aspergillus nidulans FGSC A4
Q06474       100 IVFTLAVYSFEV 111 Synechocystis sp. PCC 6803 substr. Kazusa
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