Conserved Protein Domain Family
5HT_transport_N

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pfam03491: 5HT_transport_N (this model, PSSM-Id:281488 is obsolete and has been replaced by 397524)
Serotonin (5-HT) neurotransmitter transporter, N-terminus
This short domain lies at the very N-terminus of many serotonin and other transporter proteins, eg SNF, pfam00209.
Statistics
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PSSM-Id: 281488
Aligned: 10 rows
Threshold Bit Score: 64.0955
Created: 25-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5NCR5        24 NGVLQKGVPTPADKAGPGQISNGYSAVPSTSAGDEAPHSTP 64  house mouse
XP_005327923  24 NGVLQKGVPTTEERPESGQRSNGYSAVPSPSAGDDTPNSMP 64  thirteen-lined ground squirrel
XP_001369431  24 NGILQKGLSATGDKTEMGQISNGYSAVQSPGTEEDTRNSIP 64  gray short-tailed opossum
NP_001166489  24 NSILQKSGPTSAGGVESGQIFNGYSSVPSTGMGDDAEHSVP 64  domestic guinea pig
XP_003770146  24 NGILQKGLTSPGDKAEAGQISNGYSAVQSSGEEGDAQNSnt 64  Tasmanian devil
XP_004857137  24 NSLLQKSVPASGDKTESGQISNGYSAAPSSSSGGDTGHSVP 64  naked mole-rat
XP_013836646  73 NGVLWKGLPAPGDKAESSHISNGYSAVPSPGAGDDTQNSIP 113 pig
XP_003416833  24 NGALRKGVPAPGDKAEPGQISNGYSSVPSPGAGDDTQHSTP 64  African savanna elephant
XP_006756741 100 NGILQKGVPTPGDKKESGQASNGYSVVLSLSAGDDTPHSIP 140 Myotis davidii
XP_010366257  24 NGVLQKVVPTPGDKVESGQISNGYSAVPSPGAGDDTRHSIP 64  golden snub-nosed monkey
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