Conserved Protein Domain Family
Not3

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pfam04065: Not3 (this model, PSSM-Id:281986 is obsolete and has been replaced by 461155)
Not1 N-terminal domain, CCR4-Not complex component
Statistics
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PSSM-Id: 281986
Aligned: 108 rows
Threshold Bit Score: 161.54
Created: 25-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O13870         2 SARKLQVEIEKTFKKVTDGIAIFDEVYEKLSASnSVSQKEKLEGDLKTQIKKLQRLRDQIKTWASSNDIKD-KK-A-LL- 77  Schizosaccharom...
Q57ZB9         3 NNKKSQQEIERLLRRTQEEINSYDSVYTKFNNS-TSPQREKLEAELRREARKLQRSYDLIKATCPPSDSKD-SKgS-VE- 78  Trypanosoma brucei
XP_001745134   3 DKRKLQTEIDRVLKQVSEHSEIFEDTYDKIQTAtNSNQKEKFEAELKKEIKKLQKFREQIKSWLNSSDAKS-MA-K-VLg 79  Monosiga brevic...
XP_002769571   3 ASRKLQATIDVTLKKVDEGIDEFQQVWRKVEESqNQNQREKNQIDLKKEIKKLQRFREDIMKWINGTEVKD-KG-K-LT- 78  Perkinsus marin...
XP_001466223   3 NIKKVQTEADRLLKKVNEGLDAYDELHEKLANApNASAKERLEGDLKRELKKLQRHREAMKSFMQNDDYKE-KT-K-MQ- 78  Leishmania infa...
EKG02593       3 NSKKVQQDIDRLLRRTQDGIEGYEELYNKFLKAaTQTQKERLEGDLKKEIKKLQRFRDGIKALIANPEVKD-TK-A-LE- 78  Trypanosoma cruzi
XP_004988204   3 gARKLQGEIDKCVKAVNELSDQFDFTWEKAENAtNSNQKDKFEAELKKLIKKLQKFRDQIKTWLTSSDAKT-QE-KmLK- 79  Salpingoeca ros...
KKA74911      40 rlvnqifyiqfIFIKIDEGVELFEETMGKMSESnSDNQREKLQDDLKKEIKKLQRLRDQVKNWQNSSEIKD-KD-K-LT- 115 Pristionchus pa...
ESU39021       8 hKQQLQVEIEQVLSKVDELRTSFQQHWDKLENGtPAN-REKTENLLRADLDKLKRLRKQIQTLMDLPEVATtRN-K-LK- 83  Giardia intesti...
XP_651476      3 TNRKVQSDIDKTLKVMNAGFAEFDEIREKLDETeGGHQHEKIEADLKKSLKKLQKCREQIKGWLQT-EIKN-KN-Q-LT- 77  Entamoeba histo...
O13870        78 ENRRLIEAKMEEFKAVEREMKIKAFSKEGLS--IASKLDPKEKEKQDTIQWISNAVEELERQAELIEAEAESLKAT---- 151 Schizosaccharom...
Q57ZB9        79 PWMQKLHERIETFKMCEQAMKTKGSGKDGLGtgALSE--AQQEGVKDVEAWLKNTTDSLRKQVQLSESDAERSGRG---- 152 Trypanosoma brucei
XP_001745134  80 ETRKLIENQMERYRDLERDAKTKAYSNEGLDk--RSKLDPEEQEKQDCRDDLNRYIEDIKLQVDMIEAEIETTSNA---- 153 Monosiga brevic...
XP_002769571  79 ESRRKIEVEMERFKEFERESKTKPFSFMGLq--AQDRLDPAEQKRMETRSRLEEYVDQLKQQNDEYTAEIEKIVGE---- 152 Perkinsus marin...
XP_001466223  79 VSRKKIEERMETFRAIEREMKTKAFSNEGLAsaALERADSA------TEQWLKDAIEEGRKKIELLEYEVQKANNG---- 148 Leishmania infa...
EKG02593      79 SYQKNIEEKMEVFKTCERETKTKAFSKEGLAatS-----PHETPQAHTEAWMKSAMEDARKQIEIIEYDVERNTRG---- 149 Trypanosoma cruzi
XP_004988204  80 EYRRKIEVRMERYRDLERDAKTKAYSKEGLDrqA--RLDPEEQEKKDMQDWINKTMDELRVRIDLLEASL----VA---- 149 Salpingoeca ros...
KKA74911     116 SYRKLIESKMEQFKDVERDHKTKPHSKQGLC--AEEKLDPKERARHECVEWLNNTIRGLNDENDKFEASLELLATGengr 193 Pristionchus pa...
ESU39021      84 RCTDAIEADMRRHYILERESKTKQFSNVALNdeNEKRAGP----RASTQAWLDLCLTELNNRLEDLRSQLDGVQLQ---- 155 Giardia intesti...
XP_651476     78 EAKKQIEERMEAFKEIERISKIKPYSIEGLArvSDS-GSVEEQSTEEEQTWIEQIINNLESQIEDLNREKEPQK------ 150 Entamoeba histo...
O13870       152 -F----KR----------GKKDLSKLsHLSELESRIERHKWHQDKLELIMRRLENSQ-ISPEAVND-IQEDIMYYVECSQ 214 Schizosaccharom...
Q57ZB9       153 -NhgrnKN----------S--------VSATTSTRTQKLKFHVARLELLLKGIANGD-VNPESVYG-IKERVEAIKRG-- 209 Trypanosoma brucei
XP_001745134 154 -K----RK----------KKT----EeVLEALQARIERHQRLVAKIEMVIRGLDNNN-LEPSQLED-VKEGIEYHINDNT 212 Monosiga brevic...
XP_002769571 153 -G----GRekgkkkksksSKLSSADStRVAELKIWIARHQWHQAKLEQLIRKLDNEEdVDYDELEI-TEQALDYYLEEHE 226 Perkinsus marin...
XP_001466223 149 -R----VR----------R----GKQqQKSEYQIRLENLQTHFFKWESLLRMVNNEE-LDTDEVDD-LQEPIQKVLEDDV 207 Leishmania infa...
EKG02593     150 -H----HG----------RGKNTASAd-----ATRLQKLKFHLGKLEQLLKAVTNGD-ADLDEVGD-IEERVQRFLQNET 207 Trypanosoma cruzi
XP_004988204 150 -K----GK----------RKKASLSDdEVENRKFWIQSHKIHISRLELLLKLLDNDS-VPAAQIEP-LQDEFETYFDENE 212 Salpingoeca ros...
KKA74911     194 rR----GK----------GKEDPKKVeKEKELKTLMEGVKFHIDKLELTMRLVDNES-LDPKEVEEaLKEEMEQLFSQFE 258 Pristionchus pa...
ESU39021     156 -G----ST----------KKN--MKItKVNAADKLIVKLEEHKEQLEDIIAAYEEGY-VT--------HADIELYLKKSL 209 Giardia intesti...
XP_651476    151 --------------------KKKQSQqKKNQILKQISILQSHIENLNVIDKALKYGF-LDDEDVNE-FQEEVEMTVESKM 208 Entamoeba histo...
O13870       215 SE---------DFA--ED----E--NLYDEL 228 Schizosaccharomyces pombe 972h-
Q57ZB9       210 -----------DTNgsDDddnnEdeDLYAQF 229 Trypanosoma brucei
XP_001745134 213 DP---------DFV--ED----E--YLFDDI 226 Monosiga brevicollis MX1
XP_002769571 227 NP---------DYY--HD----E--ELYANh 240 Perkinsus marinus ATCC 50983
XP_001466223 208 DL---------EVM--ED----M--SIYDSF 221 Leishmania infantum JPCM5
EKG02593     208 NS---------DDD--DDe---E--TLYSGF 222 Trypanosoma cruzi
XP_004988204 213 NS---------DFY--ET----D--WFYEDL 226 Salpingoeca rosetta
KKA74911     259 TE---------GTL--YDc---E--GAYDEL 273 Pristionchus pacificus
ESU39021     210 DEvirackggaDID--IT----T--VIYDDI 232 Giardia intestinalis
XP_651476    209 ------------IT--ND----D--SIelyk 219 Entamoeba histolytica HM-1:IMSS
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