2NYT,3E1U


Conserved Protein Domain Family
APOBEC_C

?
pfam05240: APOBEC_C (this model, PSSM-Id:283020 is obsolete and has been replaced by 398766)
Click on image for an interactive view with Cn3D
APOBEC-like C-terminal domain
This domain is found at the C-termini of the Apolipoprotein B mRNA editing enzyme.
Statistics
?
PSSM-Id: 283020
View PSSM: pfam05240
Aligned: 98 rows
Threshold Bit Score: 60.5566
Threshold Setting Gi: 82183444
Created: 24-Jun-2015
Updated: 5-Aug-2015
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2NYT_D       126 PEIQAALKKLKEAGCKLRIMKPQDFEYVWQNFVEQEEgesKAFqPWEDI 174 human
XP_011710634 129 PNYQQGLRSLSEKGVSVKIMDYEDFKYCWEKFVYDDG---EPFkPWKGL 174 pig-tailed macaque
XP_009232650 128 RDYRGALRRLRQAGAHVKIMDYEDFAYCWENFVYNEG---QPFmPWYKF 173 Sumatran orangutan
XP_008973355 313 tDYQEGLCSLSQEGASVKIMSYKDFVSCWKNFVYSDD---EPFkPWKGL 358 pygmy chimpanzee
XP_012669581 130 sDFQQGLLRMDQEGVQLHIMGYEEFEYCWDNFVYNQR---KQFvPWNGL 175 small-eared galago
XP_012669581 309 PEMHRGLRRMYQEGANVDIMSVIEFEYCWDNFVYNQG---KQFvPWNGL 354 small-eared galago
XP_008973374  88 REWRRVLRRLHKAGARVKIMDYKDFAHCWENFVYNEG---QQFmPWYKF 133 pygmy chimpanzee
ELW64468     118 PEFQEGLRRMYEEGARVAIMSPKDFENCWKDFVFNEG---RDFrPWENM 163 Chinese tree shrew
XP_006150840 300 QKFRNGLRRLCEEGARVAIMSPQDFKNCWEDFVWNKG---WNFtPrfnv 345 Chinese tree shrew
XP_012668246 262 PEIQQGLRRVFQEGAKVHIMSLKEFKYCWAKLVYNSG---MRFmPWYQF 307 small-eared galago
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap