Conserved Protein Domain Family
DUF1087

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pfam06465: DUF1087 (this model, PSSM-Id:283996 is obsolete and has been replaced by 461922)
Domain of Unknown Function (DUF1087)
Members of this family are found in various chromatin remodelling factors and transposases. Their exact function is, as yet, unknown.
Statistics
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PSSM-Id: 283996
Aligned: 26 rows
Threshold Bit Score: 64.3283
Created: 27-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9S775        829 EAAALEAQRVAAESkssA--GNSDRASYWEELLKDKFELHQAEELNALGKRKRSRKQL--VSIEEDD 891  thale cress
CAN81391      104 avveeevQKAPVENk--AavNNSERTSYWEELLRDRYEVHKIEEFNALGKGKRSRKQM--VSVEEDD 166  wine grape
XP_011622141  849 reeeakkQTEIKQQa--E--NMAERARYWEELLKGKYEEHRLEEFTALGKGKRSRKQM--VSVEEDD 909  Amborella trichopoda
KHN07035      843 aaaeeaaQKRAMET---L--NSSERTHFWEELLRDKYQEHKVEEFNALGKGKRNRKSM--VSVEEDD 902  Glycine soja
XP_009398541  847 aaEEEESKKQLPNEkasN--SNTDRANYWDELLKDRYEVQQIEEFTSMGKGKRSRKQM--ASAEEDI 909  wild Malaysian banana
XP_002437964  660 AEREEEARRKAAAE---A--ENSERLNYWDELLKGRYDVQKVEEHTAMGKGKRSRKQM--AAADEED 719  sorghum
AFW85560      101 AEK-EEARRKAAAE---A--ENSER-NYWDELLKDRYDVQKVEEHTAMGKGKRSRKQM--AAADEDD 158  Zea mays
XP_002515445  840 aAAEEAAQKAAAEAkstL--NNSERSNYWEELLKDRYEVHKVEEFNALGKGKRSRKQM--VSVEEDD 902  castor bean
XP_004244891  840 atAEEEASTAPVENkatV--NNSERASYWEELLRDKYEVHQVEEFKTMGKGKRSRKQM--VSVDDDD 902  tomato
XP_001778241  858 EEAEKEARAKLEAE---M--EGQGRAQFWDNLLKDRVVEQQVEEFEELGKGKRSRRQVpgLYSQEDD 919  Physcomitrella patens
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