Conserved Protein Domain Family
DUF1180

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pfam06679: DUF1180 (this model, PSSM-Id:284165 is obsolete and has been replaced by 429067)
Protein of unknown function (DUF1180)
This family consists of several hypothetical mammalian proteins of around 190 residues in length. The function of this family is unknown.
Statistics
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PSSM-Id: 284165
Aligned: 9 rows
Threshold Bit Score: 108.077
Created: 13-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5FVQ7        10 PCHFLASAFVL-LLLPAlnqsv-vlpsTVPRAVQESKPLEPGPRTL------------SPLPP------GPTAAQP--RG 67  Norway rat
Q8TBP5        10 LSHLLASVLLL-LLLPElsgpl-avllQAAEAAPGLGPPDPRPRTL------------PPLPP------GPTPAQQ--PG 67  human
Q1RMK9         7 PARLLPLLLLL-ALLGA----------PAARASRAQSAAPPQPGAErqp-------rpPPGPG---------------PG 53  cattle
XP_006010435   9 sSCSLAWGLLIpLLLSA-----------AAGLSSTLPPAQKMDSSN------------RPSPP------PVSGPG----- 54  coelacanth
XP_003479489   6 crcclrnllasalllllpalsrpvavlRAAEASPGLGPLASGPRTL------------PPLSP------GPTAAQS--PG 65  domestic guinea...
XP_002059356   1 ------mehvsqnwhllalvllltlflSHHDQSDAAAPNATSTNANtdprrtvkkdqaPPLPPaqdtavQQTSAESsvPE 74  Drosophila virilis
XP_002728812   6 PPPPLPLLLLLlVLLAA----------PAVLARRAESASASQPEADhq---------sPPS-----------------PG 49  Norway rat
XP_851027     10 VSPLLAAALLLlLLLPPpppgpggawaSLLRAA---APGPAAPGTS------------PPLRP------GPTAAGS--PG 66  dog
NP_001193113  10 LSRALASALLLsLLLPElsgps-agrpPAARAAPDLQPAARGPRTR------------PPPPP------GSSAARP--AG 68  cattle
Q5FVQ7        68 QAQS-EGAGPRGAESRNG------SIPGAASEadgpeg-kagessL------------GGSLAVSP------------NP 115 Norway rat
Q8TBP5        68 RGLA-EAAGPRGSEGGNG------SNPVAGLEtddhgg-kagegsV------------GGGLAVSP------------NP 115 human
Q1RMK9        54 NATGtGSGEAAGGGGSSN------SS----------------------------------GDALVTri---------sSL 84  cattle
XP_006010435  55 NASTkPALHPNSNNHNNNnsnkpmNDTRAGSG-------------G------------GGNLASVPgi---------pGS 100 coelacanth
XP_003479489  66 RAPA-ESPVLRGPEGGNG------SSPGAGLS-------------AddlsgkageaslGGSLAVSP------------NP 113 domestic guinea...
XP_002059356  75 KVVViSEKSQQAAAQHEH------PT------------------------------------GVLPeedvhiehsnmnDN 112 Drosophila virilis
XP_002728812  50 NATQlGSG--MAGGGGSN------SS----------------------------------VDAVVTri---------sSL 78  Norway rat
XP_851027     67 RAPA-DAAGPRGAEGGNG------SSPRAGLAaddsggkareedsA------------GGSLAVSP------------NP 115 dog
NP_001193113  69 RAPAlEAAGARGAEGGNG------STPGAGPAaddpggkagaggpA------------GGVLAVSP------------DP 118 cattle
Q5FVQ7       116 SDKPMT-QRALTVLVVVSAAVLVYFVVRTVRMRRRNRKTRRYGVLDTNIENMELTPL-----EQD-DEDDDNTLFDANHP 188 Norway rat
Q8TBP5       116 GDKPMT-QRALTVLMVVSGAVLVYFVVRTVRMRRRNRKTRRYGVLDTNIENMELTPL-----EQD-DEDDDNTLFDANHP 188 human
Q1RMK9        85 LRDLHTlKAAVIVACAFTAFLIACLLLRVFRSGKRLKKTRKYDIITTPAERVEMAPL-----NEEdDEDEDSTVFDIK-- 157 cattle
XP_006010435 101 PERPMT-QRALCVLVIVSAAVIVYFVIRTVRMRRKNRKTRRYGVLDTNIENMELTPL-----EQEd-DDDDNTLFDANHA 173 coelacanth
XP_003479489 114 GDKPMT-QRALTVLMVVSGAVLVYFVVRTVRMRRRNRKTRRYGVLDTNIENMELTPL-----EQD-DEEDDNTLFDANHP 186 domestic guinea...
XP_002059356 113 TDFPDTyAAVFYILVGITSSAILVLVVRVYRL-RLSRAERKYGV-QGDRANQELTPLpmaieDVNsDEEEDHTLFEVNrq 190 Drosophila virilis
XP_002728812  79 LRDLPTlKATVIVACAFSALLIACLLLRVFRLGKRLKKTRKYDIITTPAERVEMAPL-----NEDeDEDEESAVFDIR-- 151 Norway rat
XP_851027    116 GDKPMT-QRALTVLMVVSGAVLVYFVVRTVRMRRRNRKTRRYGVLDTNIENMELTPL-----EQD-DEDDDNTLFDANHP 188 dog
NP_001193113 119 GDKPMT-QRALTVLMVVSGAVLVYFVVRTVRMRRRNRKTRRYGVLDTNIENMELTPL-----EQD-DEEDDNTLFDANHP 191 cattle
Q5FVQ7       189 RR 190 Norway rat
Q8TBP5       189 RR 190 human
Q1RMK9       158 -Y 158 cattle
XP_006010435 174 RR 175 coelacanth
XP_003479489 187 RR 188 domestic guinea pig
XP_002059356 191 si 192 Drosophila virilis
XP_002728812 152 -Y 152 Norway rat
XP_851027    189 RR 190 dog
NP_001193113 192 RR 193 cattle
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