2L0Y,2ZXT


Conserved Protein Domain Family
CHCH

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pfam06747: CHCH (this model, PSSM-Id:284221 is obsolete and has been replaced by 429096)
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CHCH domain
we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterized proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesize the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit. The CHCH domain was previously called DUF657.
Statistics
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PSSM-Id: 284221
Aligned: 50 rows
Threshold Bit Score: 30.3037
Created: 14-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2L0Y_A    68 CGEQFKSAFSCFHYSTE---EikGSDCVDQFRAMQE-CMQK 104 human
Q8GYJ4    79 CGSQFSEAFLCFLKSTA---EekGSDCVNPFVALQS-CINA 115 thale cress
Q9VAA6    61 CGVDFREAFSCFQNSTA---DpkGSDCYDAFTKMRD-CFQK 97  fruit fly
Q19342    72 CGYEFREAISCQKTSSDeemE--NGACGEQLMAFME-CAMR 109 Caenorhabditis elegans
P34415    66 CGFEFREAITCQKTNSDgeiE--QGACGKELMSFME-CVTR 103 Caenorhabditis elegans
Q8LGE7    71 CQKEMDDYVGCMYYYTN---E--FDLCRKEQEAFEKvCPLK 106 thale cress
Q8BT51    34 CAASHFAVQECMAQHQD------WRQCQPQVQAFRD-CMSA 67  house mouse
Q05809    39 CYVENLALQLCHAETGD------WRQCFNEMALFRK-CWEK 72  Saccharomyces cerevisiae S288c
P42029    78 CAEPFTEYWTCIDYSGL---Ql-FRRCRKQQAQFDE-CVLD 113 cattle
AAR10214  80 CHEEFTQYATCLDKSSG---TmaFSHCRKTQGVFDK-CIKd 116 Drosophila yakuba
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