1EE8,1K82,3TWL


Conserved Protein Domain Family
H2TH

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pfam06831: H2TH (this model, PSSM-Id:284294 is obsolete and has been replaced by 399664)
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Formamidopyrimidine-DNA glycosylase H2TH domain
Formamidopyrimidine-DNA glycosylase (Fpg) is a DNA repair enzyme that excises oxidized purines from damaged DNA. This family is the central domain containing the DNA-binding helix-two turn-helix domain.
Statistics
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PSSM-Id: 284294
Aligned: 14 rows
Threshold Bit Score: 119.702
Created: 27-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1EE8_A 121 LGPEPL--------SEAFAF---------------PGFFRGLKES----ARPLKALLLDQRLAAGVGNIYADEALFRARL 173 Thermus thermophilus HB8
P55045 132 IGPEPN--------AKDFKL---------------KPFEEGLAKS----HKVIKTLLLDQHLVAGLGNIYVDEVLWAAKV 184 Streptococcus mutans ...
Q9CIK4 132 IGPEPT--------YETFDE---------------QIFREKLQKS----TKKIKPFLLEQTLVAGLGNIYVDEVLWLAKI 184 Lactococcus lactis su...
P75402 135 LALDPLdq-----eFNHQAI-----------------FNKGHKSN----KK-IKTFILDQTNISGIGNIYADEILFASKI 187 Mycoplasma pneumoniae...
O34403 134 LGPEPD--------AEEFTS---------------AYLKDRLAKT----NRAVKTALLDQKTVVGLGNIYVDEALFRAGV 186 Bacillus subtilis sub...
P59065 137 LAPEPL--------SEAFTV---------------AFLAARLAHC----RRSIKTALLDQSIVAGMGNIYADESLFLSGL 189 Thermosynechococcus e...
Q5A4P0 141 LGPDYSkpevppkeSEPFVFgdpdsdnhgrarlsiDEFSALILSK----KKPIKSLLLDQTYFAGVGNWVADEVLFQAHI 216 Candida albicans
P9WNC3 144 LARDPL--------DPRFDC---------------DAVVKVLRRK----HSELKRQLLDQRVVSGIGNIYADEALWRAKV 196 Mycobacterium tubercu...
P74290 143 LGP------------EPFGA---------------DFTAEYLYEKlkssRRPLKNALLDQRLVAGLGNIYADEVLFFCGF 195 Synechocystis sp. PCC...
3TWL_A 146 LGPDAL--------LEPMTV---------------DEFAESLAKK----KITIKPLLLDQGYISGIGNWIADEVLYQARI 198 thale cress
1EE8_A 174 SPFRPARSLTEEEARRLYRALREVLAEAVElgGSTLSDQ 212 Thermus thermophilus HB8
P55045 185 DPERLASQLKKSEIKRIHDETIRILQLAIE--KGGSTIR 221 Streptococcus mutans UA159
Q9CIK4 185 HPEKVANQLTESSIHLLHDSIIEILQKAIKlgGSSIRTY 223 Lactococcus lactis subsp. lactis Il1403
P75402 188 HPETLAKNLNLSQYQLICQNATDILKKAVEmkGTTIGTF 226 Mycoplasma pneumoniae M129
O34403 187 HPETKANQLSDKTIKTLHAEIKNTLQEAId--AGGSTVR 223 Bacillus subtilis subsp. subtilis str. 168
P59065 190 HPTQSAHTLTPEQVQRLHGVICQVLREGIAagGTTIRTF 228 Thermosynechococcus elongatus BP-1
Q5A4P0 217 HPNEIISSKIPKDLEYVHPVIKQLYDSLIYvcEEAVRVE 255 Candida albicans
P9WNC3 197 NGAHVAATLRCRRLGAVLHAAADVMREALA--KGGTSfd 233 Mycobacterium tuberculosis H37Rv
P74290 196 HPTMASNQVSLQDCELIHQQIQATLTAAIE--AGGTSFS 232 Synechocystis sp. PCC 6803 substr. Kazusa
3TWL_A 199 HPLQTASSLSKEQCEALHTSIKEVIEKAVEvdADSSQFP 237 thale cress
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