2ZG2,1U9K,3BIK,2ATP,2H32,1OCW,2UWE,1KJ2,1A6U,3UPA,2OI9,1HNG,1HNF,4FRW,4BFI


Conserved Protein Domain Family
V-set

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pfam07686: V-set (this model, PSSM-Id:284989 is obsolete and has been replaced by 400157)
Click on image for an interactive view with Cn3D
Immunoglobulin V-set domain
This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others.
Statistics
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PSSM-Id: 284989
View PSSM: pfam07686
Aligned: 70 rows
Threshold Bit Score: 50.5474
Threshold Setting Gi: 584905
Created: 13-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2ZG2_A     6 QVQKS-VTVQEGLCVLVPCSFSypwRSwySSPPLYVYWFRDGEI-PYYAEVVATNnpdRRVKPETQGRFRLLG----DVQ 79  human
Q99795    25 ETPQDvLRASQGKSVTLPCTYH---TSt-SSREGLIQWDKLLLT-HTERVVIWPF---SNKNYIHGELYKNRVsisnNAE 96  human
Q9R121    32 IELVP-PMVAEGGNSVLFVHEM---PL----NVQAFYWYKQRDPtKSYEVARYLT---PTNESSKMPQHSGRK-----TV 95  Norway rat
Q3LFS9    38 ieavP-PQVAEDNNVLLLVHNL---PL----ALGAFAWYKGNTTaIDKEIARFVP---NSNMNFTGQAYSGRE-----II 101 house mouse
Q9JHL7    38 vdavP-PNVVEEKSVLLLAHNL---PQ----EFQVFYWYKGTTLnPDSEIARYIR---SDNMSKTGPAYSGRE-----TI 101 Norway rat
O75871    38 IEALP-SSAAEGKDVLLLACNI---SE----TIQAYYWHKGKTAeGSPLIAGYIT---DIQANIPGAAYSGRE-----TV 101 human
Q3KPI0    38 IASAP-FEVAEGENVHLSVVYL---PE----NLYSYGWYKGKTVePNQLIAAYVI---DTHVRTPGPAYSGRE-----TI 101 human
P37998    25 KKNIT-ILGALERDINLDI--P---AFqmSEHVEDIQWSKGKTK-----IAKFKN---GSMTFQKDKTYEVLK------- 83  horse
1HNF_A     4 TNALE-TWGALGQDINLDI--P---SFqmSDDIDDIKWEKTS---DKKKIAQFRK---EKETFKEKDTYKLFK------- 64  human
CAA44076  38 iESTP-FNVAEGKEVLLLVHNL---PQ----HLFGYSWYKGERVdGNRQIIGYVI---GTQQATPGPAYSGRE-----II 101 human
2ZG2_A    80 KKNCSLSIGDARMEDTGSYFFRVergrdvKYSYQQNKLNLEVT 122 human
Q99795    97 QSDASITIDQLTMADNGTYECSVslm-sdLEGNTKSRVRLLVL 138 human
Q9R121    96 FYSGSLLIRNVTQADSGVYTLLTfn---tEMQSELTHVHLEVR 135 Norway rat
Q3LFS9   102 YSNGSLLFQMITMKDMGVYTLDMtd---eNYRRTQATVRFHVH 141 house mouse
Q9JHL7   102 YSNGSLFFQNVNKTDERAYTLSVfd---qQFNPIQTSVQFRVy 141 Norway rat
O75871   102 YPNGSLLFQNITLEDAGSYTLRTin---aSYDSDQATGQLHVH 141 human
Q3KPI0   102 SPSGDLHFQNVTLEDTGYYTLQVty---rNSQIEQASHHLRVY 141 human
P37998    84 --NGTLKIKHLERIHEGTYKVDAyd--sdGKNVLEETFHLSLL 122 horse
1HNF_A    65 --NGTLKIKHLKTDDQDIYKVSIyd--tkGKNVLEKIFDLKIQ 103 human
CAA44076 102 YPNASLLIQNIIQNDTGFYTLHVik---sDLVNEEATGQFRVy 141 human
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