Conserved Protein Domain Family
GCFC

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pfam07842: GCFC (this model, PSSM-Id:285127 is obsolete and has been replaced by 400273)
GC-rich sequence DNA-binding factor-like protein
Sequences found in this family are similar to a region of a human GC-rich sequence DNA-binding factor homolog. This is thought to be a protein involved in transcriptional regulation due to partial homologies to a transcription repressor and histone-interacting protein. This family also contains tuftelin interacting protein 11 which has been identified as both a nuclear and cytoplasmic protein, and has been implicated in the secretory pathway. Sip1, a septin interacting protein is also a member of this family.
Statistics
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PSSM-Id: 285127
Aligned: 36 rows
Threshold Bit Score: 115.242
Created: 14-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q55R35        550 LAPLSNSFELLIHKFQEEYq---SLKLDDVIVGAIGQILRNAFTEWRPFDVSSnVLLSSLKTWKKAYNlpeiidndtava 626  Cryptococcus ...
Q4P968        489 LEEFTPLIEQLQREYDEKQi--lQLALDQAVVEAITPALRAIWCGWKPLEQPR-LTSRYLCQWKALLP------------ 553  Ustilago maydis
Q296V1        610 IELILMKFYAWRKTDMTSYl---DAFVSLCLPKLLAPLVRHELLVWSPLLDVY--------------------------- 659  Drosophila ps...
Q011W8        443 LTAVKKHAEDWKRTHLASYk---STYMSASVPHLFAPFVRLELIAWSPLFPPA--------------------------- 492  Ostreococcus ...
Q54JF1        631 INYIADKFKHWKSKDLKSYq---KAQMPFIMPSILAPFIRLQMIDWSPLDDIY--------------------------- 680  Dictyostelium...
Q5B1K2        312 LDYVTDQLESLEIQYRAEId---EYRLWETAVAAIHPLFREAMEDWEPLKAPT-FLVANLRRLQPILS------------ 375  Aspergillus n...
Q0CQW3        291 VDEVTDKLESMEIKYHNDId---EYRLSETAVAALHPLFRQAMEEWEPLKEPT-FLVSNLRRLQPLLS------------ 354  Aspergillus t...
Q2HBL6        474 LGRVIAGLRDASNSLSDSMlpqiKDELGSLAVAAIHPLFNQFRQLWEPLEEPKpAFVDGLNSIRGLLG------------ 541  Chaetomium gl...
Q7S0X4        484 LRRTISGLVSASDSFSDAMlpqiKDEVALLAVAAVYPALREYLQIWKPLEDPKpGFVDGLMSIRKLLG------------ 551  Neurospora cr...
XP_001544497  314 WEQITRQLEALEIQYEDVFd---EYQLSELAVAAVHPLFRESMEEWEPLNDPT-YLVSNLQRLQPILSrk---------- 379  Ajellomyces c...
Q55R35        627 tlslrgknAAVDRIDAGGERVMTAWESLIWHF----------NEWDPLSPNDAVHLVESWEPILPLFVKDNILDQLVLPK 696  Cryptococcus ...
Q4P968        554 --------NQDSVAPSSSSATMTPFDALLWTYwmprv-rtclSTFSARRPASAIDLVEAWRPVLARFMFDNIIDQLIVPR 624  Ustilago maydis
Q296V1        660 ----------------------ADIETMHWYQasmlyacqadETIDQLKNDPDVNLVP------------ALIDKIVLPK 705  Drosophila ps...
Q011W8        493 -----------------DAKAPASLDSMSWYAqlfdygmvdgSFD---EGDEDANLLP------------KIVEHLVLPI 540  Ostreococcus ...
Q54JF1        681 ------------------------FDTMSWYNqlfs--------ygggGGDDDDILIP------------KLVEKIIIPK 716  Dictyostelium...
Q5B1K2        376 --------RKASEGQLVQRSSTSPYETMIYTLwlprvrsallNEWDVFNPSPATTLIVSWKELLPPFVYANVLDQLVVPK 447  Aspergillus n...
Q0CQW3        355 ---------RKKKDDYAPRQSTSPYETMIYSLwlprvrsallNDWDMFDPSPATSLIVAWKDIIPQFVYTNVLDQLVVPK 425  Aspergillus t...
Q2HBL6        542 --------LDHQSKKTYRKPTATPYETMMYELwlrtl-tttvREWNVRDPDPLIAVLDAWAPLLPPFVRAQLF-QAITRK 611  Chaetomium gl...
Q7S0X4        552 --------LDQKTKHTHRRATATPYETMMYQLwlpsv-asavRTWDVREPDQLIAVFEAWDGLIPSFIRSQLL-QDIVRK 621  Neurospora cr...
XP_001544497  380 -------pHNVQEGDCRQKHSTTPYETMVYTIwlprirsailNDWDVHDPSRATALIDAWKDVLPEFICSNVLDQLIAPK 452  Ajellomyces c...
Q55R35        697 VKAAIEQ-WDPkrNKRERrsks-----lasIVFPWLPLLG-ERVDE--------------------VMDLAKRRIRHVMR 749  Cryptococcus ...
Q4P968        625 LSRSVAAcDAPtsMDALEq-----------IVFPWLAVLGvERLAE--------------------VLTQAKQRLRSALK 673  Ustilago maydis
Q296V1        706 VTSLVTEcWDPlsTTQTLrlvg-----finRLGRDFPLTGtNKQLKk-------------------LFESIMERMRLALE 761  Drosophila ps...
Q011W8        541 VSDAVEQwWEPrdPAQSRalas-----tlrDVLVYVEPNScEEARE--------------------VVIAVRRRLKQCAE 595  Ostreococcus ...
Q54JF1        717 VETFITYiWNPlsKSQTTnlkn-----tidEILIYINDENhQNNNNnnnnnnnnnnnnnnnnnnnnVNQEVKFLFSQILS 791  Dictyostelium...
Q5B1K2        448 LTSGLNS-WKPkrSSSSShsqqn--srvpwWLFTWLQYLDeRHTNPkqa---------------tgLLSDAKRKFRRVLD 509  Aspergillus n...
Q0CQW3        426 LTEGIKQ-WKPrsSSRRHassqqnssrfpwWLFTWLQYLDeRHTNPkqp---------------tgLMSDAKRKFRVVLD 489  Aspergillus t...
Q2HBL6        612 LEEALQK-WQP---KKHThnl------phrWIFPWLPHLPpTHLDPlst---------------tgLVADVRRKFRQLID 666  Chaetomium gl...
Q7S0X4        622 LEEAVQK-WHPk-KKSSTsnl------phvWIFPWLPYLPsTHLDPkss---------------tgLVADVKRKFRQLID 678  Neurospora cr...
XP_001544497  453 LSTAIKE-WKPrsKKKRNgtssqt-sqfpwWLFDWLRYLDeRHTNPkap---------------tgLLSDAKRKFRLMLD 515  Ajellomyces c...
Q55R35        750 SWAVKDGVPEELSRWrKDVYSS-----------NEWDKLIIQFVLPKLGLCLReDFTINPrKQ--DM--VPLQDWVLPWH 814  Cryptococcus ...
Q4P968        674 MCSISQGPSRGLRDW-SSLYTTa----------AEWEALLLSSLVPRLSAYLKrRLTISAgET--QD--MTPLVDVLKWS 738  Ustilago maydis
Q296V1        762 N----------------DVFIP------------IFPKQVQ----EAKTSFFQ--------RQfcSG--LKLFRNFLSWQ 799  Drosophila ps...
Q011W8        596 A-----------------CTIP------------TYAPAVT-ACAPDAARHAE--------SRfrLA--VDVIKSALAFD 635  Ostreococcus ...
Q54JF1        792 T------------------LNY-----------SISNGNLL---IPYSNRDLT--FSIKM-YM--YS--LTMLDSIKIWS 832  Dictyostelium...
Q5B1K2        510 TWDLSAGPVPGFDLW-HDALSS------------EFDTCLRNHLLPRLAAHLRaDFDVNP-QD--QD--LTAFENILKWK 571  Aspergillus n...
Q0CQW3        490 NWDLDRGLISGIELW-RDALGS------------EFDVCLRNHLLPRLGRHLReDFEVNP-QD--QD--LSALEDVLKWK 551  Aspergillus t...
Q2HBL6        667 AWDFSRGVIPGLKQW-KDILRPssssgsssrdrDLWTPLVMNHLLPSMARYLGaHFRVEP-QD--QApyMEALDKLLEWG 742  Chaetomium gl...
Q7S0X4        679 VWEFSRGVIPGLKQW-KEVLRPrr-------gsDQWGPLVMNHLLPSMARYMRkNFRVDP-RD--QEpyMDMLEGLFKWL 747  Neurospora cr...
XP_001544497  516 TWDLDSGLPGGLEFW-KEALGS------------EFDTALRNHLLPRLGRHLReEFEVNP-QD--QN--IDPFENILKWK 577  Ajellomyces c...
Q55R35        815 RLIRQSMFSHL--LEVEFFPK---WLDVL 838  Cryptococcus neoformans var. neoformans B-3501A
Q4P968        739 KVVGATVMESV--VASDFFAK---WLDVL 762  Ustilago maydis
Q296V1        800 GILGDKLLREL--AIGGLLN------RYL 820  Drosophila pseudoobscura
Q011W8        636 GVVERDALDRI--VFDGVIAAhiaPFVRL 662  Ostreococcus tauri
Q54JF1        833 SNYQYIQLDSLmnLSDDIID------FQI 855  Dictyostelium discoideum AX4
Q5B1K2        572 DWFQPNVLGLL--FVAEFFPK---FHQIL 595  Aspergillus nidulans
Q0CQW3        552 DFFKPNVMGLL--LVAEFFPK---WHNIL 575  Aspergillus terreus NIH2624
Q2HBL6        743 EVVRPSMLAEV--LVAEVFPA---WHAAL 766  Chaetomium globosum CBS 148.51
Q7S0X4        748 DVIRPSMVGEV--IVVEVFPM---WHDAL 771  Neurospora crassa
XP_001544497  578 DYFKPAIIALL--LTAELIPemaccatpl 604  Ajellomyces capsulatus NAm1
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