1UGJ


Conserved Protein Domain Family
CAMSAP_CKK

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pfam08683: CAMSAP_CKK (this model, PSSM-Id:285846 is obsolete and has been replaced by 462558)
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Microtubule-binding calmodulin-regulated spectrin-associated
This is the C-terminal domain of a family of eumetazoan proteins collectively defined as calmodulin-regulated spectrin-associated, or CAMSAP, proteins. CAMSAP proteins carry an N-terminal region that includes the CH domain, a central region including a predicted coiled-coil and this C-terminal, or CKK, domain - defined as being present in CAMSAP, KIAA1078 and KIAA1543, The C-terminal domain is the part of the CAMSAP proteins that binds to microtubules. The domain appears to act by producing inhibition of neurite extension, probably by blocking microtubule function. CKK represents a domain that has evolved with the metazoa. The structure of a murine hypothetical protein from RIKEN cDNA has shown the domain to adopt a mainly beta barrel structure with an associated alpha-helical hairpin.
Statistics
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PSSM-Id: 285846
Aligned: 28 rows
Threshold Bit Score: 143.16
Created: 13-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1UGJ_A          8 PRLYKEPSAKSNKFIIHNALSHCCLAGKVNEPQKNRILEEIEKSK---ANHFLILFR--DSSCQFRALYTLS-------G 75   house mouse
CBY11893      331 TRVFKEPTTKSNKQLMEMALKFHALPGPVNKNERLKAMDSMSNSG---ANHFLALYK--D--KAYRGLYEVH-------T 396  Oikopleura di...
XP_002503457   31 PRLFKAAPPLSNKKLVRNALRHVCLAGAAMRTQLDEALTALDAVApdvATVFVILFRenTSPHKYRALYALVsgdggvdD 110  Micromonas sp...
GAA49242     1059 TKLFVQLQSKSNRRVIANALSHCCLAGPVNLEAKQTALTALGCSD---GKHFIVLLR---SHCQYSGLYSFS-------- 1124 Clonorchis si...
NP_001294847  247 HKLYAKTVTKSNRGLINNALQFSVFPGAVNNATRQATITQMASSS---SKHFLILFR--DQKCQYRGLYTWD-------- 313  Caenorhabditi...
AAX30444      150 PRLFVKPKAKSNRTVVVNAISHCCLAGTVNEPTKQLALKELAATE---GTHFMILFR--DSRCQYRAVYSFD-------L 217  Schistosoma j...
XP_002135174  103 SKLYRQPAGKSNRGNILNAVEYCILPGAVNSKAKQKVIEKIARSE---AAHFLVLFR--DVGCQFRALYSYM-------P 170  Drosophila ps...
XP_002081925  215 PKLYKQPAAKSNRGIILNAVEYCVFPGVVNREAKQKVLEKIARSE---AKHFLVLFR--DAGCQFRALYSYQ-------P 282  Drosophila si...
EFX79702        4 PRLYKQPAARSNRSIILNAVEYCVFPGVVNREAKQRVLEEITRSE---SKNFLVLFR--DGGLTFRALYSFN-------P 71   common water ...
XP_002409429 1368 PKLFVKPAAKSNRGIVLNALN-TVLAGQVNADTKRRVLEEMGVSD---SKHFLILFR--DAGCQFRGLYSYQ-------P 1434 black-legged ...
1UGJ_A         76 --ET-EEL-SRLAGY-GPRTVTPAMVEGIYKYNSDRKRFTQI-PA-KTMSMSVDAFTI 126  house mouse
CBY11893      397 veEL-MRI-SKIHGT-GPKEVSETMIAELLKFNSGSKNFQLV-DG-KTLSPAIDGFRL 449  Oikopleura dioica
XP_002503457  111 --AD-GVL-VKIHGTgGPARVGLQWVDATMKYDSGQREFKPL-ATsGRLTPLTAAVTL 163  Micromonas sp. RCC299
GAA49242     1125 --AAdDVG-VRISGL-GPKRIDNSLVERFYKYDSGSKRFTEItST-SHLSTVVDAVML 1177 Clonorchis sinensis
NP_001294847  314 --EIsDTA-VKISGQ-GPPKCTEAMMNSMFKYDSGAKNFTNI-AT-KHLSATIDGFAI 365  Caenorhabditis elegans
AAX30444      218 --EL-EEL-KIICGN-GPRRITHDMVNRFFKYNSGTKQFTQItST-KHLSPVVDAVTI 269  Schistosoma japonicum
XP_002135174  171 --ESgDRVqTKLYGT-GPSQVDGAMLDKFFKYISERKCFSEV-HT-RHLNVTIDAFTI 223  Drosophila pseudoobscura pseudoobscura
XP_002081925  283 --ET-DQV-TKLYGT-GPSQVEEVMFDKFFKYNSGGKCFSQV-HT-KHLTVTIDAFTI 333  Drosophila simulans
EFX79702       72 --EK-EEI-IKMYGT-GPKLVNDTMFEKFFKYNSGGKCFSQV-HT-KHLTVTIDAFTI 122  common water flea
XP_002409429 1435 --ER-EEV-GRLFGV-GPRTVTAPMMDLFFKYNSGAKSFSRI-HT-KHLTVTIDAFTI 1485 black-legged tick
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