1M1J,1DEQ


Conserved Protein Domain Family
Fib_alpha
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pfam08702: Fib_alpha (this model, PSSM-Id:285864 is obsolete and has been replaced by 462570)
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Fibrinogen alpha/beta chain family
Fibrinogen is a protein involved in platelet aggregation and is essential for the coagulation of blood. This domain forms part of the central coiled coiled region of the protein which is formed from two sets of three non-identical chains (alpha, beta and gamma).
Links
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Statistics
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PSSM-Id: 285864
Aligned: 72 rows
Threshold Bit Score: 149.977
Created: 13-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1M1J_E        67 AGGCKHPLDELGVLCPTGCELQTTLLKQEKTVKPVLRDLKDRVAKFSDTSTTMYQYVNMIDNKLVKTQKQRKdNDIILSE 146 chicken
XP_005460214  41 KEWPFCTDVEWGPKCPSGCRIQGLMEKYDHNMLKKIEKIRSLLDQNKAKHRSADTVSKQTYDYLKEKLTTDAgYDNNYFD 120 Nile tilapia
CAF87511      43 KEWPFCSDDDWGPKCPSGCRIQGLMDKHDFSLLKKIEKIRNLLDQNKAKFRTADQASKQTYDYLKDKLTLDSdNSNKYYA 122 spotted green p...
XP_002198584  50 KSWPICADDDWGTKCPSGCRMQGLIDEKDQEFSHRIDKIKKLLSDNQNNHKKSNQIIVETVNALKPNLDSAQeLDETYGR 129 zebra finch
XP_005810816  42 REWPFCTDDDWYSKCPSGCRIQGLMDKNDHELLKKIAKIRSLLDQHKARHRSVDLVSKQTYDILTEKLTLDTgNDNMYYN 121 southern platyfish
XP_003221786  50 KSWPTCSDEEWGIKCPSGCRMQGLIDETDREFNDRINKIKKLLSDNQNSYKKSNILKQELTSFLERNLVDEQeLDNGYGQ 129 green anole
NP_001258840  50 KNWPICVDDDWGTKCPSGCRMQGIIDDTDQNYSQRIDNIRQQLADSQNKYKTSNRVIVETINILKPGLEGAQqLDENYGH 129 chicken
NP_001181918  46 KEWPGCTDDDWGSKCPSGCRVQGLMDKADHDLLKKIEKIRRLLVEGQKLYRSADEVSKTTYTYLREKLTSNSgYDNRYMS 125 zebrafish
XP_002933535  51 KNWPICSDEDWGPKCPSGCRLQGLVDKTDKDFAKRVETIKQKLKDGESSHKSIDLKTKQTYQFLKDNLVQAQqSDGKYNQ 130 western clawed ...
XP_006629594  48 KEWPICLDEDWGPKCPSGCRIQGLLTKADKDLADKIDKIRKFLDENRNKYRSADQITKTTYDVLREKLVLNTgADNRFQN 127 spotted gar

1M1J_E       147 YNTEMElHYNYIKDNLDNNIpSSLRVLRAVIDSLHKKIQKLENAIATQTDYCRSPCVASCNIP 209 chicken
XP_005460214 121 LAQTLRqRITDMKIKIDRQV-TVLAALRDRVKDQVIEMQRLEVDIDIKLRSCKGSCAGYSEYQ 182 Nile tilapia
CAF87511     123 LAQNLRrNINDMKIKIDAQL-RALAALKDRVRDQVSEMQRLEVDIDIKLRSCKGSCERYSAYQ 184 spotted green pufferfish
XP_002198584 130 LSGELRrRIMTLKQRVVTQV-NRIKALQSSIQEQVVEMKRLEVDIDIKIRACKGTCAKSFDYk 191 zebra finch
XP_005810816 122 LAQTLRqRITEMKVRIDRQH-KALAALKARVKDQVVEMQKLEIDIDIKLRSCKGSCGAHTVYQ 183 southern platyfish
XP_003221786 130 ISDDLRrRLVTLKQRVFNQV-NRIKVLQNTIRNQVGELKRLEVDIDIKIRACKGSCARTYNYH 191 green anole
NP_001258840 130 VSTELRrRIVTLKQRVATQV-NRIKALQNSIQEQVVEMKRLEVDIDIKIRACKGSCARSFDYQ 191 chicken
NP_001181918 126 LAEQLRqRITDIKIKIDRQL-RLLDALKSQVKDQVVVMQRLEVDIDIKLRTCKGSCASYSEfs 187 zebrafish
XP_002933535 131 VSEDLRkKIEYLKLKVSNQV-ERIKALQKNIRDQVVEMKRLEVDIDIKIRACKGSCAKNTDYk 192 western clawed frog
XP_006629594 128 LADQLRqRIIEMKLKIDQQN-SLLIALKSRVRDQVNEVHRIEVDIDIKIRSCKGSCASAHEYt 189 spotted gar
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