Conserved Protein Domain Family
SCHIP-1

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pfam10148: SCHIP-1 (this model, PSSM-Id:287158 is obsolete and has been replaced by 431089)
Schwannomin-interacting protein 1
Members of this family are coiled coil protein involved in linking membrane proteins to the cytoskeleton.
Statistics
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PSSM-Id: 287158
Aligned: 6 rows
Threshold Bit Score: 286.046
Created: 26-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EFA04405     114 RRTDREEIRRRLAMGSE-DDYYt----DRPGRKPSLQARLQSGMNLQICFMNETVSDTESPNSDNEcpltnpKQPKTcpk 188 red flour beetle
XP_011253247 550 RRNDREEIRRRLAMGPDaEDLR-----AERGRKPSLQSRLQSGMNLQICFMNETSSDTESPGSEND------TSPGStpt 618 Florida carpent...
XP_003978235  12 QRNERESIRQKLALGSFyDDEPviytsGSRKGPSSR---QQSGVNLQVCFINDSSSDKDSDAEDSRtet-slDTPLS--- 84  torafugu
NP_001071259  12 QRNERESIRQKLALGSFyDDGQitftgCSKSGKNCLSSRLQNGVNLQMCFVNDSSSDRDSDAEDSRtet-slDTPLS--- 87  zebrafish
XP_007063149  33 QKNERESIRQKLALGSFfDDGPgiytsCSKSGKPSLSSRLQSGMNLQICFVNDSGSDKDSDADDSKtet-slDTPLS--- 108 green sea turtle
EFX75062      41 KRNDREEIRRRLAMGVEaEDGQe----SDKGKRPSLQSRLQSGMNLQICFMNETADGGDIDNQKELldnlklGSPQS--- 113 common water flea
EFA04405     189 tspektlP-----PARPATLSLGQPLl--qPVTQPMTETDFFARQARLQTEARMALAQAKEMARMQMEIERQRQ--KKSP 259 red flour beetle
XP_011253247 619 slgskqlGgkqhaPMRPQVLSLPSLRlesaNSTPPVDEADFFARQARLQTEARMALAQAKEMAHMQMEVERQRL--KQSP 696 Florida carpent...
XP_003978235  85 -------------PVSKQSSSLSDRDtaeeDSDPLDDCGGFWRVQRRLQEEARVALALARPMARMQVEVERQIQmhRRSP 151 torafugu
NP_001071259  88 -------------PMSKQSSSLSDRDtgeeDLDSEDS--EFWRLQRRLQEEARVALALARPMARMQVEVERQIQihRRSP 152 zebrafish
XP_007063149 109 -------------PMSKQSSSYSDRDtteeESESLDD-MDFLTRQKKLQAEAKMALAMAKPMAKMQVEVEKQNR--KKSP 172 green sea turtle
EFX75062     114 -------DiknpyVSLPVVSSLKQPKl-----qQELAELDFFSQQAKLQMEARTALAQAKELARVQMQVERQQR--KHTR 179 common water flea
EFA04405     260 ITEM------VRNSLEKVGIPFPEEKRRLSRQILTEMNVAQLQVIVNDLHTQIETLNESLVKFLMDRDDLHMEQDSMLVD 333 red flour beetle
XP_011253247 697 ITEM------VRCSLEKVGVQLGEDRRRLSRVLLTELNVAQLQVVANDLHARIAALNEALVEGLLRRDDLHMEQDSMLVD 770 Florida carpent...
XP_003978235 152 VADLlphlphISEGLMK---------RNLRRGDMRDMSLGQLQVITNDFHAQIQSLNEELVQLLLLRDELHVEQDAMLVD 222 torafugu
NP_001071259 153 VADLlphlphISECLMK---------RNLRPVDMRDMSLGQLQVITNDLHSQIQGLNEELVQLLLMRDELHMEQDAMLVD 223 zebrafish
XP_007063149 173 VADLlphmphISECLMK---------RSLKPTDLRDMTIGQLQVIVNDLHSQIESLNEELVQLLLIRDELHTEQDAMLVD 243 green sea turtle
EFX75062     180 ISDL------VRQSLEKLGIPFPWDCRRLSRQILTELNIAQLQVIVNDLHTQIEGLNEELVQLLLKRDDCHMEQDSMLVD 253 common water flea
EFA04405     334 IEDLTRYLGAKEQVFK 349 red flour beetle
XP_011253247 771 VEDLTRYLGAKQESLK 786 Florida carpenter ant
XP_003978235 223 IEDLTRQAHRHQRHQA 238 torafugu
NP_001071259 224 VEDLTRHAHSQQRHMM 239 zebrafish
XP_007063149 244 IEDLTRHAESQQKHMA 259 green sea turtle
EFX75062     254 IEDLTRFLTAKQAald 269 common water flea
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