Conserved Protein Domain Family
Nipped-B_C

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pfam12830: Nipped-B_C (this model, PSSM-Id:289591 is obsolete and has been replaced by 463722)
Sister chromatid cohesion C-terminus
This domain lies towards the C-terminus of nipped-B or sister chromatid cohesion proteins.
Statistics
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PSSM-Id: 289591
Aligned: 149 rows
Threshold Bit Score: 103.74
Created: 28-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q0UHM0       1407 LHIAQRFLQNFVD-TALKYNNDLGVSATFVIASISRQGLVHPKECGAALVALGTS-PIDIISQTASVEHKRIHEKQESYL 1484 Phaeosphaeria...
Q4DSU4         35 TWVLQKFHVQILQ-LCEISSVAVRQLAFEVLQLCAEGGLLPPSKYASALIVLAADpQNEVIRKAAVDCMASQTKRYADIV 113  Trypanosoma c...
Q385W6       1345 TWLLQQFHEHVTL-LCGSYMLPVRELAMEILHLCAAGGLLPPPRYTKALIVLGADpQSGDVRRTAVAYVLEQCERHGDLM 1423 Trypanosoma b...
XP_002906797 1258 GNVMQAELVHILA-LSLQRVPQIRKEAIACIGALLTPGLVNPLQCIPNLVTLETD-RVSDVRDAAFSLLLAL-EKYRSQF 1334 Phytophthora ...
CDJ01763     2288 GTVAQIYLKTALEhCIICPSTTVRTKALSLVATAARQGLVHPVSFIAPLISLQTD-PDFAVRSRAISILQEISQRYSGFL 2366 Echinococcus ...
CDS29043     2466 STVVQIYLQTALEhCVTSASTTVRTKALTLISTAMRQGLMMPFPFIAALICLQTD-VENTIKSRAVILLQEIAQQHSGFL 2544 Hymenolepis m...
XP_002185061 1314 GGVLTNHADRLFE-MSQSKDRRVRYAALDLIGLLLRQGLVNPNECIPFLFALQGDvENAAIRSLALHLLMKEGERRPDAL 1392 Phaeodactylum...
EJK64800     1437 GSVLTKHARRLYE-MKESKDDKVRLMVIDLIGHLLRQGLINPMETVPHLLAVQGDvKSPQTRALALKLLINEGEKRPEML 1515 Thalassiosira...
XP_002287148 1584 GSVLTKHAVRLYE-LTTSKEEKVRNMICDLIGHLLRQGLINPMDTVPFLLALQGDvKSPSTRALALKLLVNEAEKRPDIM 1662 Thalassiosira...
XP_001464054 1554 TWIFQQFHGDIARlSCGTPNAQVRSLCLRLFLQAAHGGLLPPDKYMQAIVALAAD-VHGPLRQQAAASLNIHCERHEEVV 1632 Leishmania in...
Q0UHM0       1485 EKEYMQSVRMAYDYQVDvfgdshgmr----------------------------eatygaklGKLF-EA-LksGKKVTFK 1534 Phaeosphaeria...
Q4DSU4        114 AANAATGVVKAFDLHDAcgvdvlrsavls----------------------dtgpeavecvhAHLF-Ts----FRKRHRD 166  Trypanosoma c...
Q385W6       1424 VASSTAGIVKAFDLHAVcgvdvvksaigvydt----------------qhhngqgegeycvhAYLF-Ks----LHKKYRD 1482 Trypanosoma b...
XP_002906797 1335 HAPLLKGIQDSYLFQLRvygdatalgi-------------------------denkkayclfGRLYmNC-Vk-STKAQGT 1387 Phytophthora ...
CDJ01763     2367 ALKAAQGIRSGFLLQRMiasslnkqqtiirgayvgkaaatstsscpdktdvssaqarplalsHPTY-SL-Lq-GNKQHRR 2443 Echinococcus ...
CDS29043     2545 ALKAAPGIRSAFQLQKIiaastsssgssddrqevlirgayvskpiagseksdatlvrptalnHPTY-SL-Lq-SNKHHRR 2621 Hymenolepis m...
XP_002185061 1393 RQRICVGAKQAYDFQRRiysqkdaasalit-------------------vrrgrvqgtecifGSVFrNC-Is-KSQKQRR 1451 Phaeodactylum...
EJK64800     1516 RQRVCAGIVQAYHFQNSvynasgrgatallt-----------------rdeagrcvtetifdAVIK-ESgMk-NKRAQRQ 1576 Thalassiosira...
XP_002287148 1663 NQRIQAGIKRAFNFQRTvyseetdgaprvtali-------------enkvegvktatetifdSVIIeSS-Lr-SKKAQRQ 1727 Thalassiosira...
XP_001464054 1633 GASVGRGVVLAFCLHHTcgvnllrsavlpgkplaat-------tatavdsgagdvlsgcsvhSSVY-TL-L---HKRLRD 1700 Leishmania in...
Q0UHM0       1535 KFINNLCKQVdfnfa--------------------------------kldasG----EPP------------------SS 1560 Phaeosphaeria...
Q4DSU4        167 AFLSSLLRYFyqegraa----------------------------qwlrehrEkdgeSAR------------------SP 200  Trypanosoma c...
Q385W6       1483 AIVSSLMCYFheearvgqwmreh-----------------kltcsggaasgsKglmeLTP------------------SP 1527 Trypanosoma b...
XP_002906797 1388 LFLRALVNQFtdqgtvlqpl-----------------------knkpftshsK----TFT------------------TS 1422 Phytophthora ...
CDJ01763     2444 SLITSLVNLFdmdyipqpasqaispyismapdvavrksaftlgatetdvvdaT----SED------------------NG 2501 Echinococcus ...
CDS29043     2622 SLISNLVNRFdnd------------------------------------ynsQ----SRS------------------SY 2643 Hymenolepis m...
XP_002185061 1452 GLFKNLLSFFeta------------------------------------evnV----ETPfaknvhllkisgggqangSD 1491 Phaeodactylum...
EJK64800     1577 GLLKGILSLFekd------------------------------------pgeQ----FDH------------------SK 1598 Thalassiosira...
XP_002287148 1728 GLYKSIISLFekd------------------------------------vthE----TTP------------------TN 1749 Thalassiosira...
XP_001464054 1701 SMITTLVRFFyqdd-----------------------------------karS----WCE------------------EH 1723 Leishmania in...
Q0UHM0       1561 -----------------------------VLFARFCLENLALIDLATLEEVAMCLSALE 1590 Phaeosphaeria nodorum SN15
Q4DSU4        201 -----------------------------FPFLGHLAIVMAHVPYTQESDVLHVLDGCR 230  Trypanosoma cruzi
Q385W6       1528 -----------------------------LPFLIHLTVVLAHIPFQLESDVVHLLDSCR 1557 Trypanosoma brucei
XP_002906797 1423 -----------------------------LKYLCYLAQILSTLPYEVEDEPLYIIYSIN 1452 Phytophthora infestans T30-4
CDJ01763     2502 -----------------------------LSELIYVCDHLAHFPYKTVDEVYYLAHYLD 2531 Echinococcus multilocularis
CDS29043     2644 asdngtssrksssagvnsansdspsgdngLQELVFICDQLAHFPYKTVDEIYYLARILD 2702 Hymenolepis microstoma
XP_002185061 1492 -----------------------------LSLLSFTSQILAYLPYAAASDPLFIIHHIg 1521 Phaeodactylum tricornutum CCAP 1055/1
EJK64800     1599 -----------------------------LPLLSFAAEILAHLPYTTLNDPLFCVYnas 1628 Thalassiosira oceanica
XP_002287148 1750 egkapn-----------------hgaadrVPLLAFASQILAHLPYNCASDPLFVVYHat 1791 Thalassiosira pseudonana CCMP1335
XP_001464054 1724 arqitdaaatlaa---ssspsvvfglfhpYLFLCHLTLALATLPFPHESDVLHLLQQar 1779 Leishmania infantum JPCM5
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