Conserved Protein Domain Family
zf-C3HC4_4

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pfam15227: zf-C3HC4_4 (this model, PSSM-Id:291880 is obsolete and has been replaced by 464570)
zinc finger of C3HC4-type, RING
This is a family of primate-specific Ret finger protein-like (RFPL) zinc-fingers of the C3HC4 type. Ret finger protein-like proteins are primate-specific target genes of Pax6, a key transcription factor for pancreas, eye and neocortex development. This domain is likely to be DNA-binding. This zinc-finger domain together with the RDM domain, pfam11002, forms a large zinc-finger structure of the RING/U-Box superfamily. RING-containing proteins are known to exert an E3 ubiquitin protein ligase activity with the zinc-finger structure being mandatory for binding to the E2 ubiquitin-conjugating enzyme.
Statistics
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PSSM-Id: 291880
Aligned: 10 rows
Threshold Bit Score: 57.0326
Created: 29-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O75679        40 CPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGED---LLCCCC 81   human
XP_008002760  23 CPICTAYLEKPMSLECECVFCLSCTNSLQKEPQGEG---VLCPFC 64   green monkey
XP_001490518  11 CRHCMSYLEKPMYLNCGYVCCLQCINSLQKEPDGEG---LLCPLC 52   horse
XP_002763594  10 CPICLDYLQDPVTISCGHNFCFSCITISWKDLDD-S---FPCPLC 50   white-tufted-ear marmoset
XP_012660643  13 CPICSAYLEKPIYLECECIFCLNCIYSLQMEPHGEY---LFCYLC 54   small-eared galago
XP_001516989  11 CPVCLDYFSYPTSIECGHTFCLSCIFRWSCSAAEVS---FTCPEC 52   platypus
AAI00986      16 CPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDT----FPCPVC 56   human
CAG01463      15 CPICLNLLEDPVTIPCGHSYCMGCISAYWQEQEA-----HSCPQC 54   spotted green pufferfish
BAD92206      30 CPVCLDFLQEPVSVDCGHSFCLRCISEFCEKSDGAQggvYACPQC 74   human
XP_003429698  11 CPICSDYFHNPVSIACGHNFCQTCIDGVSLLP-------FRCPEC 48   platypus
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