Conserved Protein Domain Family
PTRF_SDPR

?
pfam15237: PTRF_SDPR (this model, PSSM-Id:291890 is obsolete and has been replaced by 464578)
PTRF/SDPR family
This family of proteins includes muscle-related coiled-coil protein (MURC), protein kinase C delta-binding protein (PRKCDBP), polymerase I and transcript release factor (PTRF) and serum deprivation-response protein (SDPR). MURC activates the Rho/ROCK pathway. PRKCDBP appears to act as an immune potentiator. PTRF is involved in caveolae formation and function. SDPR is involved in the targetting of protein kinase Calpha to caveolae.
Statistics
?
PSSM-Id: 291890
Aligned: 32 rows
Threshold Bit Score: 258.04
Created: 17-Jul-2015
Updated: 5-Aug-2015
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
A1L260        19 VSALSILSLLERVSTIIDGVQASQQRMEERQQQLEGSVSAVQSELLKLARDHGATATTVDKLLQKARRVSTHVKEVRSRV 98  zebrafish
XP_001363685  47 VNGVLVLSLLDKIIGAVDQIQLTQAQLEERQAEMEGAVQSIQGELSKLGKAHATTSNTVSKLLEKVRKVSVNVKTVRGSL 126 gray short-tail...
XP_005041885  29 DAAYTIVTVLDKVANIVDSVQASQKRIEEKHREMENAIKTIQIDILKLAQAHGNTGFTVNKLLQKTRKVSSTMKEVRARV 108 collared flycat...
ETE68923      28 DAAFTIVRVLDKVATIVDSVQASQKRIEQRHREMEDAIKTIQIDILKLAQAHGNTGYTVNKLLEKTHKVSARVKEVRARV 107 king cobra
XP_006010362  27 VNIMTIMSLLDKVAEIVDSVQASQRRIEERHTEIENSIKTIQIDILKLAKDHNTTGSTVNKLLEKTRKVSSNVKDVRARV 106 coelacanth
XP_002935326  28 DAALTIVTVLDKVATIVDTVQASQKRIEERHREMEDAIKTIQIELLKLAQAHSNTSYTVNKLLEKTRKVSSNVKDVKSRV 107 western clawed ...
XP_005012098  32 INGVMVLTLLDKIIGAVDQIQLTQTQLEERQQEMDSAVTSIQGELTKLTKAHTTTSNTVNKMLEKVRKVSVNVKTVRQNL 111 mallard
XP_006801700  69 VNGVMVLSLLDKIIGAVDQIQQTQSGLEARQQEMERTVTSIQGELTKLTKSHSTTSNSVNKMMEKVRKVSVNVKTVRATL 148 Neolamprologus ...
XP_003978032  69 aNGVIVLSLLDKIIGAVDQIQQTQSGLESRQQEMERCVTGIQGELTKLTKSHSTTSNSVNKMMEKVRKVSINVKTVRATL 148 torafugu
XP_004080775  69 VNGVLVLSLLDKIIGAVDQIQQTQSGLETRQQEMERSVISIQGELTKLTKSHSTTSNSVNKMMEKVRKVSVNVKTVRATL 148 Japanese medaka
A1L260        99 EKQNVRVKKVETTQDELLTRNKFRVVIYQGEKEV---------------------PSVA-VTKTPKGA----------Gl 146 zebrafish
XP_001363685 127 ERQAGQIKKLEVNEAELLRRRNFKVMIYQDEVKL---------------------PAKLsISKSLKESel-------lPe 178 gray short-tail...
XP_005041885 109 ERQSTSVRKVEAKQQEMLRKNKFRVVIYQEETEC---------------------PSSLsVIKEM--------------- 152 collared flycat...
ETE68923     108 EKQNVNVQKVETKQEEMLRKNKFRVVIYQEDIQC---------------------PSTLtVVKDR--------------- 151 king cobra
XP_006010362 107 DKQSARVKKVETTQEELLRKNRFRVVIYQGETEV---------------------PC-AsVSKFPKDC----------Av 154 coelacanth
XP_002935326 108 DKQSDQVQKVESKQEEMLRKNKFRVVIFQEDIEC---------------------PTKLtVAKEs--------------- 151 western clawed ...
XP_005012098 112 EKQAGQIKKLEANEAELLKRRNFKVMIYQDEVKL---------------------PSKLsISKSLKEG----------Ek 160 mallard
XP_006801700 149 EKQGGQIKKLENNEAELLKRRNFKVMIYQDEVKV---------------------PSKLsISKSMKVS----------Es 197 Neolamprologus ...
XP_003978032 149 EKQGGQIKKLENNEAELLKRRNFKVMIYQDDVKVssklsmsksmkfseyasgsrgGSLLeLKETVEEP----------Ge 218 torafugu
XP_004080775 149 EKQGGQIKKLESNEAELLKRRNFKVMIYQDETKL---------------------PSKLsISKSMRTSesvtgsrggsMl 207 Japanese medaka
A1L260       147 -------------------AELEV--------EPDEYD----------IP-AD-----LSSDEE-YMVVEDAESSRGARL 182 zebrafish
XP_001363685 179 -------------------KEGDE--------LGEGIE----------KP-EDdatleLSSDEA-VEVEEIIEESRAERI 219 gray short-tail...
XP_005041885 153 -------------------TAGET--------IEDDFF----------PP-DD-----LSSDEE-YYIEE----SKATKF 184 collared flycat...
ETE68923     152 -------------------TQGES--------TEDAFC----------PP-DD-----LSSDEE-YYIEE----SRTARF 183 king cobra
XP_006010362 155 -------------------SGG----------QEENLDne------tgPP-AD-----LSSDEE-YMVVEEQETA-AARL 191 coelacanth
XP_002935326 152 -------------------ALDGN--------LRDNLY----------TP-DD-----LSSDEE-YCVQE----SRTSRL 183 western clawed ...
XP_005012098 161 -------------------QEKEGegeevpagEDHAEE----------DH-IQ-----LSSDEE-VEIEEIIEESRAERI 204 mallard
XP_006801700 198 vsgsrggsllelkeaaeepGEEGE--------EGEKAD----------KPhVD-----LSSDEEgLEIEEAIEETRAERI 254 Neolamprologus ...
XP_003978032 219 -------------------DEVAD--------EEKTEQ----------PH-VD-----LSSDEEgLEIEQTIEASRAERI 255 torafugu
XP_004080775 208 -------------------ELKEA--------MEEPGEeagegekedkPH-VD-----LSSDEEgLEIEEVIEESRAERI 254 Japanese medaka
A1L260       183 KQSGLKGIENIKAAFS----------------------K----------------------E------------------ 200 zebrafish
XP_001363685 220 KRSGLRRVDDFKKAFSkekmektkvrtrenlektrlktK----------------------E------------------ 259 gray short-tail...
XP_005041885 185 KKSGMRRIDDIKKAFS----------------------R----------------------E------------------ 202 collared flycat...
ETE68923     184 KKLGMRRINNIKKAFS----------------------R----------------------E------------------ 201 king cobra
XP_006010362 192 KKSGLKRIDTIKKAFT----------------------K----------------------E------------------ 209 coelacanth
XP_002935326 184 KKSGMKRIDNIKMAFS----------------------K----------------------E------------------ 201 western clawed ...
XP_005012098 205 KRSGMKRVDDFKKAFS----------------------K----------------------Ekmektklktkenlektrh 240 mallard
XP_006801700 255 KRSSLQRVQTLKTVFS----------------------K----------------------E------------------ 272 Neolamprologus ...
XP_003978032 256 KRSSLQRVQNLKTVFS----------------------KdkmdktraktkeniertkqktiE------------------ 295 torafugu
XP_004080775 255 KRSSLQRVQTLKTVFSrekmdr-----------traktK----------------------E------------------ 283 Japanese medaka
A1L260       201 NM---------------NKTRektrenlsktkeslsktgQ---------------------------------TLG---- 228 zebrafish
XP_001363685 260 NL---------------EKTR------------------H---------------------------------NLE---- 269 gray short-tail...
XP_005041885 203 NI---------------QKTR------------------Q---------------------------------NFG---- 212 collared flycat...
ETE68923     202 NL---------------QKTR------------------Q---------------------------------NFG---- 211 king cobra
XP_006010362 210 NI---------------QKTR------------------Q---------------------------------NIG---- 219 coelacanth
XP_002935326 202 NM---------------QKTK------------------Q---------------------------------NFG---- 211 western clawed ...
XP_005012098 241 NL---------------EKTR------------------H---------------------------------NLE---- 250 mallard
XP_006801700 273 KMdktraktkenlektrQKTK------------------E---------------------------------NLEktkq 301 Neolamprologus ...
XP_003978032 296 NI---------------EKTK------------------QktrdnlertkqktkdniertkqktkaniektrhNIE---- 338 torafugu
XP_004080775 284 NL---------------EKTR------------------Qkt-----------------------------kdNIE---- 297 Japanese medaka
A1L260       229 ------------------------------------T----------------KFNTLGEKI-VPPEQRE---------- 245 zebrafish
XP_001363685 270 ------------------------------------K----------------RMNKLGTRI-VTAERREkmkt------ 290 gray short-tail...
XP_005041885 213 ------------------------------------K----------------KVNRLQTRI-VTPERRErirq------ 233 collared flycat...
ETE68923     212 ------------------------------------K----------------KVDRLRTRI-VTPERRErirq------ 232 king cobra
XP_006010362 220 ------------------------------------Q----------------KMNRISTRI-VPPERREkirqsg---- 242 coelacanth
XP_002935326 212 ------------------------------------N----------------KVNRIRTRI-VTPERRErirq------ 232 western clawed ...
XP_005012098 251 ------------------------------------K----------------RMNKLGTKI-VTNERREkmkt------ 271 mallard
XP_006801700 302 ktkenlektrqrtkenlektkqktkenlektrhnieK----------------KMGKLGTRMsVNPERKQkmkt------ 359 Neolamprologus ...
XP_003978032 339 ------------------------------------K----------------KMEKIGTRMsVNPEHKQkiqt------ 360 torafugu
XP_004080775 298 ------------------------------------KtkqktkenlektrqktKDNIEKTKQ-KTKENLEktrhniekkm 340 Japanese medaka
A1L260       246 ----------------------KIKQSSe-------RLKENIAKKAP 263 zebrafish
XP_001363685 291 -------------------srdKLRKSFtpdhvvyaRSKTAVYKVPP 318 gray short-tailed opossum
XP_005041885 234 -------------------sgeRLRQSGerlrqsgmRIKKSISQAAP 261 collared flycatcher
ETE68923     233 -------------------sgeRLRQTGi-------RFKKNIANVAP 253 king cobra
XP_006010362 243 -----------------ektgeRLRQSGe-------RLKQSITKAAP 265 coelacanth
XP_002935326 233 -------------------sgeRLKKSGe-------RFKQSIVKAAP 253 western clawed frog
XP_005012098 272 -------------------srdKLRKSFtpnhtiyaRSKTAVYKVPP 299 mallard
XP_006801700 360 -------------------ssdKMKKAFtpdhvvyaRSKTAVYKVPP 387 Neolamprologus brichardi
XP_003978032 361 -------------------srdKMKKAFtpdhvvyaRSKTAVYKVPP 388 torafugu
XP_004080775 341 gklgtrmsvnperkqkmktssdKMKKAFtpdhvvyaRSKTAMYKVPP 387 Japanese medaka
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap