3MXN


Conserved Protein Domain Family
RMI2

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pfam16100: RMI2 (this model, PSSM-Id:292718 is obsolete and has been replaced by 465022)
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RecQ-mediated genome instability protein 2
RMI2 is a eukaryotic family of an OB3, oligo-nucleotide-binding proteins. It is an essential component of the RMI complex that plays a vital role in the processing of homologous recombination intermediates in order to limit DNA-crossover-formation in cells.
Statistics
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PSSM-Id: 292718
Aligned: 27 rows
Threshold Bit Score: 117.802
Created: 24-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3MXN_B        25 PLKVLAEQLRrd---------aEGGPGAWrlsraaagrGPLDLAAVWMQ----------------------------GRV 67  human
XP_006384684   7 ALKLLCVQLKdas------etpSQNALTL---------GGILFQRAWLQ----------------------------GIL 43  black cottonwood
XP_002271178   7 ALKVMCGQLRkak------ettSQNAFTL---------GGVLFQRAWLQ----------------------------GVL 43  wine grape
XP_006838750   7 ALKLFCRQLKdav------pthSSPPSMt--------lAGILFQRAWLQ----------------------------GIL 44  Amborella trich...
XP_006349064   7 ALKVFCSQLNnak------attTQQSQAaf------tlSGILFQRVWLQ----------------------------GIL 46  potato
XP_003538189   7 ALKLFCSQLKqar------evaM-PCQTQsqsqssftlGGLLFQRPWLQ----------------------------GVL 51  soybean
XP_002466663   7 ALKIFSSQLAdctea--pssegSSAAQMLn---------GIRFQRAWIQdsq-----------------------rqGVI 52  sorghum
NP_001173587  30 ALKLFGCQLAgateappsesdgTSQAQMLy---------GIRFQRVWLQ----------------------------GVV 72  Japanese rice
XP_009417130   7 ALKLFCGELKdvr------------aaSAsasssaatlFGILFQRAWLQ----------------------------GVL 46  wild Malaysian ...
EMT10904       7 ALKLFASQLAgstta--pssegSSPAQML---------FGIRFQRAWIQvpssspsrpflsfarslcpaltarcgrqGVV 75  Aegilops tauschii
3MXN_B        68 VmA--DR--G--E---AR--LRDPSGDfsvrglERVPRGR-----P-----CLVPGKYVMVMGVVqac-----spePCLQ 121 human
XP_006384684  44 VsN--DG--D--G----RllLDDGTGV------IELCLSPdf-rlR-----HWDSGMYVMVVGGYfvrh----getPMIK 97  black cottonwood
XP_002271178  44 VsV--SD--D--Aq--GRfvLDDGTGVihlslsGDFLHRN------------WKIGMYVMVVGGYfvrs----gepPMIK 99  wine grape
XP_006838750  45 VsG--Q---D--E---GCfiLDDGSDVielslsNEFQQ-------E-----SWKTGMYVMVIGAYtirt----ddrPIIK 98  Amborella trich...
XP_006349064  47 VsTptTD--S--S---GRflLDDGTGVieiqllSDFLTLS------------WVKGMYVMVVGLYfvqk----gslPLVK 103 potato
XP_003538189  52 VsA---S--D--A---GSllLDDGTDl------VELSLNSef-rhR-----PWKLGMYVMVVGGYaarp----gklPMIK 105 soybean
XP_002466663  53 LsA--DY--S--EagdGRllLDDGSCIv-----DLFVLPRea-egG-----YWRPGMYVMVIGPYiaaes--ndnyPAIK 113 sorghum
NP_001173587  73 VlA--DYrdG--A---GHilVDDGSCVa------EITLTP-----KeaegqPWREGMYVMVLGSYsgkeslpranrPVIK 134 Japanese rice
XP_009417130  47 VsG--T---D--E---GRflLDDGSDVve--llLSAESQP-----Q-----QWKIGMYVMVVGPYvaaq---sgglSTIR 101 wild Malaysian ...
EMT10904      76 VrA--DY--SvgD---GRlfVDDGSCV------TELMLRPedakgQ-----PWRPGMYVLIIGAYiapqs--teslPMVK 135 Aegilops tauschii
3MXN_B       122 AVKMTDLSDNPIHESMWELEVED 144 human
XP_006384684  98 VHKMVDLSAFPDREAMWYLEVME 120 black cottonwood
XP_002271178 100 VHKIVDLSPFPDRESMWYLEVIE 122 wine grape
XP_006838750  99 VHKIVDLSPYPDREAMWHLEVIE 121 Amborella trichopoda
XP_006349064 104 IHKIVDLSPLPDRESMWYLEVVE 126 potato
XP_003538189 106 VHKIVDLSSSPNREAMWYLEVME 128 soybean
XP_002466663 114 VHKIVDLSSQPDREAMWYMEVAE 136 sorghum
NP_001173587 135 VHKLVDLSAQPDRESMWYMEVVE 157 Japanese rice
XP_009417130 102 VHKMVDLSQHPDREAMWHLEVME 124 wild Malaysian banana
EMT10904     136 VHKIVDLSAQPDREAMWYMEVAE 158 Aegilops tauschii
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