Conserved Protein Domain Family
Keratin_2_head

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pfam16208: Keratin_2_head (this model, PSSM-Id:292825 is obsolete and has been replaced by 406589)
Keratin type II head
Statistics
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PSSM-Id: 292825
View PSSM: pfam16208
Aligned: 45 rows
Threshold Bit Score: 41.6017
Threshold Setting Gi: 327264544
Created: 29-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6IMF3        21 NFSSGSAGLV-SFQRRSTS--SSMRRSgG---GG-GgRFSgggFcGSSGGGFGSKSLVNLGGGRSISISVAGG------- 86  Norway rat
XP_012660966  16 NFSSCSAGSPqNLNHFRAGsvSCRSGSgF--------------RsLGSFGGFGSRSVVNFG---SYSPRMAAVgpcpvrc 78  small-eared galago
XP_005325043  16 SFSSCSAVTPqNLSHFQASsvSCKSGPgL--------------RgL---GAFGSRSVINFG---SHAPRMAAVgphptrc 75  thirteen-lined ...
XP_002923286  16 NFSSCSAVNPqNLNRLRASsvSCRSGPsF--------------RgL---GNFGSRSVMAFG---SCSPRIAAVgprpirc 75  giant panda
XP_003355445  16 NFSSCSAMTHqNLNRFRTSsvSCRSGPsF--------------RgL---GGFGSRSVISFG---SCSPRIAAVgprpirc 75  pig
XP_006904633  16 NFSSCSAAAPqNLKCFRASsvSCRSGPsF--------------RgL---GGFGSRSVITYG---SCSPRTAAVcprpvrs 75  black flying fox
XP_003252150  16 NFSSCSAMTPqNLNRFQANsvSCWSRPgF--------------RgL---GSFGSRSVITFG---SYSPRIAAVgsqpvrc 75  northern white-...
XP_005570984  16 NFSSCSAMTPqNLNRFRANsvSCWSGPgF--------------RgL---GSFGSRSVITFG---SYSPRRAAVgprpgrc 75  crab-eating mac...
NP_001008812  16 NFSSCSAMTPqHLNRFRASsvSCRSGPgF--------------RgL---GGFGSRSVINFG---SSSPRIAVGcsrpiry 75  Norway rat
XP_003217073   4 QFSSRSFST--GGRRGYSFpgSGFRVGnGstsLVpVgGVG------ASSGGFGSRSLHSLGGSKKISMGIVSG------- 68  green anole
Q6IMF3        87 GSSy-GGGFGGGSYg-------GGSFG-GG---SF--GGGVG--GGFGGgg----------fGGGGFGSg-GGFGG--GR 137 Norway rat
XP_012660966  79 GAGfgAGSAMGLGF--------GGGSGvGL---GFraSSGVG--LACGAssg----------lgyGFGG--PGFGYrlGG 133 small-eared galago
XP_005325043  76 GVGfgPGSRMAFSF--------GDRSGvGL---GFraCSGVG--LGFGGgsg----------fghGFSG--PGFGYrvGG 130 thirteen-lined ...
XP_002923286  76 GVGfgAGSGMAFGF--------GDGSGaGL---GFgpSSCVG--LGFGAgsg-----------------lgyGFGYrvGG 125 giant panda
XP_003355445  76 GVGfgVGSGMAFGY--------GDGSGaGL---GFgsGSCVG--LGFGAgsg----------lgyGFGG--PGFGYrvGG 130 pig
XP_006904633  76 GAGfgASSGMAFGF--------GAGCGaNL---GFgaGSGVG--LGFGAtsr----------lgyGFGG--PGFGYrvGG 130 black flying fox
XP_003252150  76 RVGfgAGCGMGF----------GDGRGvGL---GPraDSCVG--LGFGAgsg----------igyGFGG--PGFGYrvGG 128 northern white-...
XP_005570984  76 GVGfgAGCGMGF----------GDGRGvGL---GPgaGSCVG--LGFGAgsg----------igyGFGG--PGFGYrvGG 128 crab-eating mac...
NP_001008812  76 GVGfgAGNGIAFGS--------GDGSGiCL---GYraGSGVG--LGFGAgsclgygfggpgfGGPGFGG--PGFGYriGG 140 Norway rat
XP_003217073  69 -----GGGSGGYFAggvggrnlGSGLGfSSfstGY---GGLGsgVGFGGgaclggg--valgsgvGQGGpaGGFGG--GG 136 green anole
Q6IMF3       138 FGgg-fGPV-CPPGGIQEVTINQSLLQPLNVEVDPQIQKV 175 Norway rat
XP_012660966 134 IG-----VP-AAPS-ITAVTVNQSLLTPLNLEIDPNAQRV 166 small-eared galago
XP_005325043 131 IV-----GP-AAPS-ITAVTVNQSLLTPLNLEIDPNAQRV 163 thirteen-lined ground squirrel
XP_002923286 126 IG-----VP-AAPS-ITAVTVNQSLLTPLNLEIDPNAQRV 158 giant panda
XP_003355445 131 IG-----VP-AAPS-ITAVTVNQSLLTPLNLEIDPNAQRV 163 pig
XP_006904633 131 VG-----VS-ATPS-ITPVTVNQSLLTPLNLEIDPNAQRV 163 black flying fox
XP_003252150 129 FG-----VPxA-PS-ITAVTVNKSLLSPLNLEIDPNAHRV 161 northern white-cheeked gibbon
XP_005570984 129 VG-----VP-AAPS-ITAVTVNKSLLTPLNLEIDPNAQRV 161 crab-eating macaque
NP_001008812 141 IG-----GP-SAPA-ITAVTVNQSLLTPLNLEIDPNAQRV 173 Norway rat
XP_003217073 137 YGlsgpGPL-PAPGRIHNVVVNKNLLAPLRVEVDPDIQRV 175 green anole
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