Conserved Protein Domain Family
Tub_N

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pfam16322: Tub_N (this model, PSSM-Id:292938 is obsolete and has been replaced by 465092)
Tubby N-terminal
Tub_N is the N-terminal region of Tubby proteins. It carries a nuclear localization signal and is able to activate transcription.
Statistics
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PSSM-Id: 292938
Aligned: 21 rows
Threshold Bit Score: 81.9032
Created: 17-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_005989763 119 RQRALLEQKQKKKRQEPLMVQSNVDSRSRTRRMKQSEEQAPLVE-----------------Sylnsnsstiyhvqeaehd 181 coelacanth
XP_420992     29 RQRALLEQKQKKKRQEPLMVQSNVDSRTRARRTKHSEEQAPLVE-----------------Sylnsnsstiyhvqeaeqe 91  chicken
XP_006642659  56 RQRALLEQKQKKKRQEPLMVQANVDGRSRTRRAKQSEEQAPLVE-----------------Sylssnsstiyhvqeaeqe 118 spotted gar
XP_009301456  37 RQRALLEQKQKKKRQEPLMVQSNLDGRSRVRRTRQSEEQAPLVE-----------------S------------------ 81  zebrafish
XP_007497104  60 RQRALLEQKQKKKRQEPLMVQSNPDSRTRTRRARQSEEQAPLVE-----------------S------------------ 104 gray short-tail...
XP_003129443  29 RQRALLEQKQKKKRQEPLMVQANADGRPRSRRARQSEEQAPLVE-----------------S------------------ 73  pig
XP_002708837  29 RQRALLEQKQKKKRQEPLMVQANADGRPRSRRARQSEEQAPLVEsylsssgstsyqvqeadS------------------ 90  rabbit
XP_005689779  84 RQRALLEQKQKKKRQEPLMVQANADGRPRSRRARQSEEQAPLVE-----------------S------------------ 128 goat
XP_003972821  36 RQRALLEQKQRRKRQEPLMVQPNTEARPRRARTRRGEEQAPLVE-----------------Sqlnvtn------------ 86  torafugu
NP_001116953  28 NQRTLLEQKQRKKRQEILMVQSNRDTRQRRPKSGKCEEQAPLVQ-----------------Sqkqksvn----------- 79  western clawed ...
XP_005989763 182 dikmvtdiqapkstkktksaATsSQT---------------------------------------------G-------- 208 coelacanth
XP_420992     92 dvkvvvdaqapkstkkakaaSAsCQT---------------------------------------------G-------- 118 chicken
XP_006642659 119 dvkvvtdpqaprsakkaksaPSaSQT---------------------------------------------G-------- 145 spotted gar
XP_009301456  82 --------------------YLsGNS---------------------------------------------Stiyhvqea 96  zebrafish
XP_007497104 105 --------------------YLhSNS---------------------------------------------S-------- 111 gray short-tail...
XP_003129443  74 --------------------YLsSSGstsyqvqeadslagvtpgaarpaaapasaqrareaaavggqggapR-------- 125 pig
XP_002708837  91 --------------------LAsVQL---------------------------------------------Gatrp---- 101 rabbit
XP_005689779 129 --------------------YLsGST---------------------------------------------G-------- 135 goat
XP_003972821     --------------------------------------------------------------------------------     torafugu
NP_001116953     --------------------------------------------------------------------------------     western clawed ...
XP_005989763 209 ------------S----------ARKEKKGkh---kG---------------------IDGP------------------ 224 coelacanth
XP_420992    119 ------------S----------ARKEKKGkh---kG---------------------IDGP------------------ 134 chicken
XP_006642659 146 ------------S----------AKKEKKGrh---kG---------------------IDGP------------------ 161 spotted gar
XP_009301456  97 eqeevkavaevqA----------PRSAKKS------KpptstpqtgsakkekkgkhkgIDGP------------------ 142 zebrafish
XP_007497104 112 ------------TsyhvqeaeqdDGKLNED------P---------------------VMPR------------------ 134 gray short-tail...
XP_003129443 126 ------------K----------EKKGKHK------G---------------------TGRP------------------ 138 pig
XP_002708837 102 --------papaS----------AKRTKAA------A---------------------MAGTqggaakkekkgkhkgtsg 136 rabbit
XP_005689779 136 ------------Y----------QVQEADSvasvplG---------------------AAHP------------------ 154 goat
XP_003972821  87 ----------------------------------------------------dvlmegIDGP------------------ 96  torafugu
NP_001116953  80 ------------------------------cnvilnG---------------------IDGP------------------ 90  western clawed ...
XP_005989763 225 AA-----------------------------------FQ-DEVQEVGSQIHILtvg------------------------ 244 coelacanth
XP_420992    135 AA-----------------------------------FQ-DDVQKAGSQVQILtvg------------------------ 154 chicken
XP_006642659 162 AA-----------------------------------FQ-DEALDLGNQIQILtvg------------------------ 181 spotted gar
XP_009301456 143 AA-----------------------------------FQ-DEGQELGNQIQILtvg------------------------ 162 zebrafish
XP_007497104 135 SAkrspaagamaaagqgg----isrkekkgkskgsdgFFsDDEPDP--NAQILtvg------------------------ 184 gray short-tail...
XP_003129443 139 -A-----------------------------------ALaEDKPEARGPMQILtvg------------------------ 158 pig
XP_002708837 137 PA-----------------------------------ALaEDKSEAQGPVQILtvg------------------------ 157 rabbit
XP_005689779 155 TApasakrtkaaaaaggqggasrkekkgkhkgsggpaAPaEDKSEARGPVQILtvg------------------------ 210 goat
XP_003972821  97 AA-----------------------------------FL--EASELGMKIQIAsasq----------------------- 116 torafugu
NP_001116953  91 AA-----------------------------------FLdSGFHELDSKIQVLtvgesctdtdfnvgtgwpscnegrasp 135 western clawed ...
XP_005989763 245 -------qssLDDGDGE---TVAS-GQQ--------Q-----------GKQDLRVTMQKKGISSSMNFDEEEDE-----E 289 coelacanth
XP_420992    155 -------qssHDEDDGE---KMASgQQQ--------Q-----------SKQDLKTAMQKKGISSSMNFDEEEDE-----E 200 chicken
XP_006642659 182 -------qssICEGEGD---PVTS-TQQ--------Q-----------GKQDLRVTMQKKGISSSMNFDEEEDE-----E 226 spotted gar
XP_009301456 163 -------hspAQESEAEgqgEAVGsTHS--------Q-----------GKQDLRVTMLKKGISSSMNFDEEEDE-----D 211 zebrafish
XP_007497104 185 -------rsgSSRSLGE---AAAAgGQH--------P-----------SKPDLRTTMQTKGISSSMNFDEEEEEeeeedD 235 gray short-tail...
XP_003129443 159 -------qsdHARDAGE---TAAGgGPR--------P-----------SGQNICATMQRKGVSGSTSLEEEEEE------ 203 pig
XP_002708837 158 -------qsdHAQDTGE---TAAGgGTR--------P-----------SGQDLRATMQRKGISSSMSFDEEEED-----E 203 rabbit
XP_005689779 211 -------qsdQAQDTGE---TAAGgGAR--------P-----------GGQDIHGTMQRKGISSSMSFEEEEEE-----E 256 goat
XP_003972821 117 ------qqppSQPPSAE---VPERnGDAvtl---------------pePKTDIQELLQKQGLSGSMNFDE--PSeeeddT 170 torafugu
NP_001116953 136 cnserrgtpvSDEENTQ---PLNSiGRSnlektqqnSnrqeilrkpdvSKRDLQELLQERGISDSLNFDEdiSDdddgdD 212 western clawed ...
XP_005989763 290 D-EDSSSSSQlNSNTRPGSATSKKSNKETASA----PTP 323 coelacanth
XP_420992    201 D-ADSSSSSQlNSNTRPGSATSKKSSKEVASA----PSP 234 chicken
XP_006642659 227 D-EDSSSSSQlNSNTRPGSATSKKSNKEAASA----STP 260 spotted gar
XP_009301456 212 D-LVSSSSSQlNSNTRPGSATSKKSSKEATSA----STP 245 zebrafish
XP_007497104 236 E-EDSSSSSQlNTNARPGSATSKKSNKETASA----PSP 269 gray short-tailed opossum
XP_003129443 204 D-ESSSSSSQlNSNTRPSSATSRKSTKEAASA----PSP 237 pig
XP_002708837 204 D-ENSSSSSQlNSNTRPSSATSRKSVREAASA----PSP 237 rabbit
XP_005689779 257 E-ENSSSSSQlNSNTRPSSATSRKSTREAASA----PSP 290 goat
XP_003972821 171 DgERTPSLSPsGEMVRPASASSGKDTPEVAPR----GSP 205 torafugu
NP_001116953 213 D------DEAcNASTRPASASSKKSLTETGTAeavpPDP 245 western clawed frog
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