Conserved Protein Domain Family
SH3-WW_linker

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pfam16618: SH3-WW_linker (this model, PSSM-Id:293224 is obsolete and has been replaced by 435468)
Linker region between SH3 and WW domains on ARHGAP12
SH3-WW_linker is a natively unstructured region on Rho-GTPase activating factor 12 proteins that lies between the SH3 and the WW domains. it is found in higher eukaryotes, and the function is not known.
Statistics
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PSSM-Id: 293224
Aligned: 13 rows
Threshold Bit Score: 204.344
Created: 28-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_003979197  69 RKALMpppkplphppaasgnPPP----H-NASAV------------KGKPTSldlgLQNQPAENLH------RQESSYRR 125 torafugu
XP_004939241 115 RKALM---------------PPVkq-aG-MLPNN------------ALKLTH----GLQRSTENVNks---pELSSFGKS 158 chicken
XP_009243520  74 RKALM---------------PPVkqvaG-LPNNS---------------TKImqslHLQRSTENVNkl---pELSSFGKP 119 Sumatran orangutan
XP_008110551  72 RKALM---------------PPIkq-lS-VLPNS--------------TLKLmh--gLQRSTENVNks---pELSSFGKS 115 green anole
XP_007665995  72 RKALM---------------PPIk-----LPNNP------------K---KLvqdmPLQRSSENVNks--spELSSFGKS 114 platypus
XP_005471685  72 RRALM---------------PPQkp-------aL------------RAKPAVld--iCRASNENLNrp--qpEMSSFGRP 113 Nile tilapia
XP_008432143  69 RKALM---------------PPPkp-iS-HSHSAsgnsnprsgaslWVKPNTldlkINNQAADSLH------RNESKTRR 125 guppy
ETE72332      72 RKALM---------------PPIrslvG-LPNNS---------------LKLah--gLQRSTENVNks---pEHSTSGKS 115 king cobra
XP_006634175  75 RKALM---------------PPQkp-lH-SGALV------------KAKPNMldihPLQKSNENLAka---pEMTSFGRp 122 spotted gar
XP_011484276  69 RKALM---------------PPPkp-iPyHHGGAsktp----gssyWVKPAHldlgLKDQPAEGIS------RRESKTRR 122 Japanese medaka
XP_005994735  76 RKALM---------------PPVkq-aG-LHASG------------SSKQKs----SLQKSTENESkv---pELSSFGKP 119 coelacanth
XP_009304871  75 RRALM----------------------P-PPKPR------------AKPPNVleitHCRSSNENLNqra-ptEKSTFGRP 118 zebrafish
XP_007259732  75 RRALM----------------------P-PPKPR------------AKPPSIlhisQCPSINENPQqhrappDMISFGRP 119 Mexican tetra
XP_003979197 126 SPSAQTaatdr-fsppIHRRDSNnhR--TPGSPTDHDRALAE------GPHPDTRGKSSTLPRARARSPE---------- 186 torafugu
XP_004939241 159 SPVQVS----------CLVRDAN--Q--NLGPNNSPGQTLGLsldltqNNGKLNNELQSPKVSNQFRTIS---------- 214 chicken
XP_009243520 120 SSSVQGt---------GLIRDAN--Q--NFGPSYNPGQTVNLsldlthNNGKFNNDSHSPKVSSQNRTRS---------- 176 Sumatran orangutan
XP_008110551 116 SPVQMl----------GPIRDAN--Q--NLGPNSSPGQNTGLsldlaqNNGKF-SEFQFPKVSIQNKSFS---------- 170 green anole
XP_007665995 115 SSALAT----------SLVRDAN--Q--NFGPNSS---SQTLsldlthNNGKFGSDSQSPKVPSQHRIHS---------- 167 platypus
XP_005471685 114 SPSSTPspssdrvtppALPKDAN--Q--NVGSPH-HCKLVAElvllhnNNNHHHHPNNSTLPRMRADSPTp--------- 179 Nile tilapia
XP_008432143 126 SPSAQTassah-fsppIPRRNSN--HhhTPSTPTEHERCLAEilvqggFPQK---GSSSTLPRTRTRSPD---------- 189 guppy
ETE72332     116 YLVQA--------------QDVN--Q--NLGSNSSPGQNTGLsielalNNGKF-NDLQFVKVSNQNMNLS---------- 166 king cobra
XP_006634175 123 apgp--------vtppAPPRDAN--Q--NLGSPV-QSKSLAEhf----lNNNNISGAAGSLPGARADSPPpprppnhsrs 185 spotted gar
XP_011484276 123 SPSAQTassgh-ftppSQRRNSNhyQ--PPLSPTDHEPALEA------GSQRPQQGSSITLPRSRARSPD---------- 183 Japanese medaka
XP_005994735 120 SPAQTa----------GHARETN--Q--NLSQNNNPSQS-GQgldsiqNNVK----SHSPKTSSKNRITT---------- 170 coelacanth
XP_009304871 119 PPSTTPsplpgqqtppLLLRDSN--H--NPGMKS----VVAEltllnnNNHHNFHHANPTLPQGRAESPPrdq------- 183 zebrafish
XP_007259732 120 PPSTTPsplpgqqtppLLLRDTN--Q--NAGMRD----VLAEltllnnNNHHDHHHGNSLLSRIRPESPPkep------- 184 Mexican tetra
XP_003979197 187 ---LVRAPl----DVDST-----Q-----G-CDSAGE--ERRTNDSESGDEMSSSSTEQLQTVXSSGQGRSESPVYTNLQ 246 torafugu
XP_004939241 215 ---MGHFPcpeflEIEKTsflheQ-----S-CDSAGEgsEKIHQDSESGDELSSSSTEQAQPTTPPSQGRPDSPVYANLQ 285 chicken
XP_009243520 177 ---FGHFPgpeflDVEKTsfsqeQ-----S-CDSAGEgsERIHQDSESGDELSSSSTEQIRATTPPNQGRPDSPVYANLQ 247 Sumatran orangutan
XP_008110551 171 ---VSHFPcsdcmEIEKT-----SflqelS-CDSAGEssEKLHQDSESGDELSSSSTEQTQPTTPPSQGRPDSPVYANLQ 241 green anole
XP_007665995 168 ---MGQFPgpefmDVEKTsfsheQ-----F-CDSAGEgsERILQDSESGDELSSSSTEQIRPTTPPNQGRPDSPVYANLQ 238 platypus
XP_005471685 180 --kLGNNHks--pDGSKT-----S-----PlSELPGEgmNKLRNDSESGDELSSSSTEHMQTTSPTGQGRSDSPVYTNLQ 245 Nile tilapia
XP_008432143 190 ---SLRAP------PDVT-----Q-----H-CDSAGE--ERRTNGSESGDELSSSSTEHLQTGSSSGQGVSESPVYTNLQ 247 guppy
ETE72332     167 ---GSHFHcsecmETEKTsflqeQ-----P-CDSVGEgpEKIHQDSESGDDLSSSSTEQVQPVTPPSQGRPDSPVYANLQ 237 king cobra
XP_006634175 186 paaGRKPPld--lEADRT-----Pp----H-CDSAGEgsEKHRQDSESGDELSSSSTEHLQTASPTGPGRPESPVYTNLQ 253 spotted gar
XP_011484276 184 ---LVRDPl----EGDGT-----------H-CDSAGE--DRGTNDSESGDELSGSSTEHLQMGS-SGQVGSDSSIYTNLQ 241 Japanese medaka
XP_005994735 171 ---GGRFPcsefmEVEKTsfsqeQ-----S-CDSAGEgsEKHLHDSESGDDLSSSSTEHMQPTTPTGQGRSDSPIYANLQ 241 coelacanth
XP_009304871 184 -gcQGKLTgg--lSVD-T-----D-----G-SVSPGDgvEKMRNDSESGDELSSSSTEHIQSVSLSGQGRPESPVYTNLQ 248 zebrafish
XP_007259732 185 -gcRGKPPgglplDTDGS---------------SPGEgsEKLRNDSESGDELSSSSTEHMQTVSPTGPGRSDSPVYTNLQ 248 Mexican tetra
XP_003979197 247 ELKITQSTLPPAPAGSPLH 265 torafugu
XP_004939241 286 ELKISQSALPPLPTSAPVQ 304 chicken
XP_009243520 248 ELKISQSALPPLPGSPAIQ 266 Sumatran orangutan
XP_008110551 242 ELKISQSALPPIPTTLPIQ 260 green anole
XP_007665995 239 ELKISQAALPPLPGSPAIQ 257 platypus
XP_005471685 246 ELKISQSSLPPVPSGSPIH 264 Nile tilapia
XP_008432143 248 ELKISKKSLPPLPSGSPLH 266 guppy
ETE72332     238 ELKISQSAPPPVPISPAVQ 256 king cobra
XP_006634175 254 ELKISQAHLPPAPSGSPLH 272 spotted gar
XP_011484276 242 DLKISQANLPLQPSGSPLH 260 Japanese medaka
XP_005994735 242 ELKlslsslppapasppiq 260 coelacanth
XP_009304871 249 ELKICQSSVPPVPSTSPLH 267 zebrafish
XP_007259732 249 ELKIsqsslppipsssplh 267 Mexican tetra
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