Conserved Protein Domain Family
Fucosidase_C
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pfam16757: Fucosidase_C (this model, PSSM-Id:293362 is obsolete and has been replaced by 465259)
Alpha-L-fucosidase C-terminal domain
The C-terminal domain of PDB:1hl8 is constructed of eight anti-parallel-strands packed into two-sheets of five and three strands, respectively, forming a two-layer-sandwich containing a Greek key motif.
Links
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Statistics
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PSSM-Id: 293362
Aligned: 283 rows
Threshold Bit Score: 40.2651
Created: 16-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q15XM9        451 RKDFNSS-DIR--FTQN---GD---ALYATLMAWPEnsdELTIRSInSDNYPDKIASVTML--G-HdeALTFSQTE-KGL 517  Pseudoalterom...
EDM29582      932 KPGNAHK-ELY--FTKK---AD---TIYGLLPVWPDs-gKIEIR----DIEVSSDTKVTML--GvEg-QLKFAKTA-KGI 993  Lentisphaera ...
WP_022025608  362 GNPFGKV-PSWgtYTKK---GK---NVYVHVTKWPKn-kKLTVRKY--KNKKLK--KVYLLesG-KkiSCKGNKKGkTKV 428  Clostridium s...
WP_022307140  366 GTPFAKK-PSWgrYTRK---DN---VIYAHVMKWPKd-qKLVTKKY-AGKK---VKKVYLLqnG-K--KLKYNATG-KKV 429  Roseburia sp....
WP_040914974  354 EYAPVKR-PSWgrVLKK---GN---SLFLHVFDWPQn-qQLKVEGL---AGSLQ--KAYVFkqA-Ne-ALQFEIDD-QNF 417  Lentisphaera ...
CDA84489      369 gtqrSEVfPAWgeCIRKdekKNs--VYYLSVFKWPKd-gKLTFETP----HKVK--KATLL--A-DksTLKFSKTN-NGI 435  Bacteroides s...
WP_016196481  357 KANPLKE-MPWgrITRKe--NKkgtVLYLSVFDWPAn-gQLLLSGL-NLK----VKSAKFL--AtEt-KLEFKKED-SNL 423  Arcticibacter...
WP_014221516  370 KASPLPA-LAWgrCTKKe--QNgntTLYLSVFNWPTd-kKLIVPGL---TQPVL--SATLLa-G-Gk-KLATAASN-DGL 436  Niastella kor...
WP_021940557  362 ERVQTDE-PKWgrCTQKi--AGnrtYVYLHVIDWPEd-gQLLFRLY----EDAA--SATLLhnG-H--PLKFKNTH-DGI 427  Bacteroides e...
WP_014776274  352 QAGPVSP-RSWgvTTRR---GD---KIYVHILDWPD---EELFVPV-RDERIRQ--AVRFA----DkrAVAFSQDK-AGV 413  Alistipes fin...

Q15XM9        518 TITLP----DTSP-SRfAQVIKIT 536  Pseudoalteromonas atlantica T6c
EDM29582      994 EVILPqlnpTKLPcKD-IFTLKVT 1016 Lentisphaera araneosa HTCC2155
WP_022025608  429 TLKVT----KKVP-NKkDTVIVMQ 447  Clostridium sp. CAG:75
WP_022307140  430 IIKMP----EKKP-DKaDTVIAVQ 448  Roseburia sp. CAG:380
WP_040914974  418 TIKIPk---EAYD-EN-SSVVVLE 436  Lentisphaera araneosa
CDA84489      436 VIDVP----AKAP-DKiATVIKLE 454  Bacteroides sp. CAG:754
WP_016196481  424 NINVP----TEMP-NKvATVIKVQ 442  Arcticibacter svalbardensis
WP_014221516  437 VITVP----DQAP-DKiASVIKLQ 455  Niastella koreensis
WP_021940557  428 YIDLP----KEAP-DQyASVIKLE 446  Bacteroides eggerthii CAG:109
WP_014776274  414 TLRLG-----EKP-AGaDCIVELT 431  Alistipes finegoldii
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