Conserved Protein Domain Family
Sin3a_C

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pfam16879: Sin3a_C (this model, PSSM-Id:293484 is obsolete and has been replaced by 465294)
C-terminal domain of Sin3a protein
Sin3a_C is a family of eukaryotic species. It is found at the C-terminus of the co-repressor Sin3a, and downstream of family Sin3_corepress, pfam08295.
Statistics
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PSSM-Id: 293484
Aligned: 137 rows
Threshold Bit Score: 165.031
Created: 21-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5KJN5        952 FFANSHFYVLSRYLQMLYSRLM------------TCkti-asKL--AKENR-RPVnplalklglvdpvt----------- 1004 Cryptococcus ...
CCA73633      975 FFGNTITYVILRIFQTLYSRLL------------LCkei-tqQLs-TTTGT-HTAnpiaielglidglgpgtmnlfvpnn 1039 Piriformospor...
EMS26044     1132 FFANSTFYCLVRVLHAMYHRLL------------AFkql-aaDLa-SAHRD-KRLnpigvdlglsap------------- 1183 Rhodosporidiu...
XP_009265904 1037 FFCNSTYYIAFRLLYILYSRLH------------SFkml-aqELt--TSKK-QPVnplakemglhdtsitqtvg---ipl 1097 Wallemia icht...
XP_006958815  845 FFCNSTYYIAFRLLYILYNRLY------------SFklt-aqKLt--TTNY-KPMnplakdlglndtsvpqavg---isl 905  Wallemia sebi...
XP_007325754  527 FFTNTTFYTLVRLLQMLYSRFM------------MCkei-gqELarEKHAS-LLAnrvavelglddpngpavv----lsq 588  Agaricus bisp...
XP_001829269 1063 FFANTTFYT------------LlrllqllysrllMCkeigaeLAa-EKHSS-LLAnqiavdlglvdphgppvi-----lq 1123 Coprinopsis c...
XP_001874054  969 LFVNTTFYT------------LlrllqllysrllMCkei-gsQLalQQHAP-LLAnvvavdlglddpngpsa------vl 1028 Laccaria bico...
XP_007856602  942 FFVNTTFYTllrllqllyfrlS------------MCkev-gqQLa-SEKHShLLAnpvavelglddpngpa--------- 998  Moniliophthor...
XP_003037381  857 FFANTTFYLLLRLLQELYARLL------------TSkqtsrrHAa-ENFKS-LLAnpvavqlgldepngppal----laq 918  Schizophyllum...
Q5KJN5       1005 --qyfgilqgdnpaeHY-YSHLLSLLERYFDNE--------IEFGAFEDALRLMFTNEAYLMFNLDKVIGGIVRQIQTIV 1073 Cryptococcus ...
CCA73633     1040 eaelnpdgtpfnptsRF-YAHLLECCESLFAGD--------MDQNTFEENLRFMFGTKGYLMFTVDKVIAALIKQIHAAI 1110 Piriformospor...
EMS26044     1184 ---vpvvdtgdnppeHY-YEHMLELAEKLFDGE--------IDQQTYEEQLRYMAGVRAYPLFTLDKLISTAIKHIHTIN 1251 Rhodosporidiu...
XP_009265904 1098 lenttkdgaetpasvHY-YDYLLELSERLFEGE--------IDQNVFEESLRWMFGTRAYPIFTVDKLISQLLKQLGSIA 1168 Wallemia icht...
XP_006958815  906 lentsvngqetpasaHY-YDYLLELCERLFEGE--------IDQNLFEESLRWMFGTSAYPMFTVDKLISQILKQLGSIA 976  Wallemia sebi...
XP_007325754  589 steilgedcttekanVV-YMYLIHACDKLFDSE--------LDQATFEEHMRWFFGNKAYLLFTLDKLMMALVKQVQTIW 659  Agaricus bisp...
XP_001829269 1124 qtieamgergtvegaNAtYAYLLNACERLFDNE--------MDQPTFEEHLRWFFGTKAYLLFTIDKVIAALIKQVQTIL 1195 Coprinopsis c...
XP_001874054 1029 aqtmevlgrdssegaNVvYMYLLSACEKLFDNE--------LDQATFEEHMRWFFGTKAYHLFTLDKLITALIKQVQTII 1100 Laccaria bico...
XP_007856602  999 tvlaqhsfegstgtnVV-YMYLLDACEKVFAGD--------LDQSTFEEHMRWFFGNKAFHLFTLDKLITALVKQVQTII 1069 Moniliophthor...
XP_003037381  919 trealaergisderdMM-YMYLLDAAEKSFSNDkrtqdkdsLDNATFEEHMRWFFGFKAYQLFTLDKLIAALIKQVQTVV 997  Schizophyllum...
Q5KJN5       1074 GDLKSQELFALLQRDRANARTSTKNqIAYRMQAEGVLg--G-NENLYKIEWLPGkeTLTIQLLNEDDRSVddaE---TTQ 1147 Cryptococcus ...
CCA73633     1111 SDPQTEELISLLRTERRAEDPSTQQiITYRRNAEEIIg--Q-DDNLFRINWDHS--IMTIQLLGKTDPSTddaE---TIA 1182 Piriformospor...
EMS26044     1252 SENRCQDIVTLLEKDRARQTTTPRQqIAYRMEVEQVLe--T-DEHIYRIEWIPAsqVLTIQLLGKEDLTMddaY---ESE 1325 Rhodosporidiu...
XP_009265904 1169 SDQKCQELLYVLQAERREPSSSNSRqFIYRNKAQRIIg--S-DEPLYRIEWVGStkELRMQLLAREDLTVdvdErkqTRD 1245 Wallemia icht...
XP_006958815  977 VDTKCQELLNVLQIERKEPSSSNSRqFIYRNKAQRIIg--T-DEPLYRIEWIAStkELRMQLLAREDLTIdidErkqTKD 1053 Wallemia sebi...
XP_007325754  660 SDSKCRELWSLLQAAQASDTVSRQDiVRYRREAEQHAg--Q-DDHLYKLQWVREtqSMRISLLGPDDPSTenrT---SRS 733  Agaricus bisp...
XP_001829269 1196 SDHKSQELWTLLQTAQSSEKMTAQGiIRYRRNAEKHIgtvH-DDHLFRIQWVREkkCIRISLLSQEDVTIptdG---RPI 1271 Coprinopsis c...
XP_001874054 1101 SDNKCQELWTLLQAAQNSDRLSQQDiIRYRREAERHVg--Q-DDHLYRLQWVREskCIHVSLVGADDPSIptdG---LAI 1174 Laccaria bico...
XP_007856602 1070 SDVKCQELWSLLQSAQSSEALTNKEfIRYRREAERHVg--Q-DDHLYRVQWARDtkTIRIHLMRAEDASVdgdV---SSL 1143 Moniliophthor...
XP_003037381  998 QDHRCQELWSLLQSVQSSERISIQDtIRYRREAELHV---SqDDHLYRIRWVRAtqTLQVQLMGSDDASVdgnG----GT 1070 Schizophyllum...
Q5KJN5       1148 ERW-AQYIESFAlthptEGLl-KR--VD----SP--FLRRNItkvhsreeelsas--agpssaknnveakDGLEIKIALG 1215 Cryptococcus ...
CCA73633     1183 QRW-RRYIESYVlthptEGIk-ED--VK----NP--FLRRTVmeaplte---------------tgchadNGLEIRVCIR 1237 Piriformospor...
EMS26044     1326 AKMhQSWLASFAlmspsEGIg-aQ--VK----AP--LLKRNrvlsaned--------------pqefdllPGLEAKVSES 1382 Rhodosporidiu...
XP_009265904 1246 QKW-TYYIQSYLlqtptEGLnaD---LT----AP--FLYRSIpqqseeaeedde-----etaivdrseysNGMELRICMR 1310 Wallemia icht...
XP_006958815 1054 QRW-TYYIQSYLlqtptEGLltD---LT----SP--FLYRNIptsntqineeeesnheepeeildkseysNGLEMRICMR 1123 Wallemia sebi...
XP_007325754  734 ERW-RDYVNTYVlktptEWVpaSRggES----AV--YLRRNRragegk----------------reakkeSTMKIRVDVR 790  Agaricus bisp...
XP_001829269 1272 TRW-REYLNTYVmsyptEWVpsTK--RNn--gPI--FLRRTLqneesta---------------stltrdDQTKIRIGLP 1329 Coprinopsis c...
XP_001874054 1175 SRW-QGYLNTFVmtyptEWLpaAH--TKekrsPV--MLKRCVransdsi--------------asttkieGYMKIRVRLP 1235 Laccaria bico...
XP_007856602 1144 GRW-REYVDTYVmrhptEWMgdLS--GE----KSgiFLKRTRndtal------------------gasieGNLSIRISLP 1198 Moniliophthor...
XP_003037381 1071 SRW-REYVNSYVlrhrtEYAprES--EG----APrvFLKRSLheeeag-----------------rvyaeTDMAIRVTLP 1126 Schizophyllum...
Q5KJN5       1216 NYRMFFTPGTEDYF 1229 Cryptococcus neoformans
CCA73633     1238 TYKLFFGPETEDYF 1251 Piriformospora indica DSM 11827
EMS26044     1383 GYKLFFVANTEDFL 1396 Rhodosporidium toruloides NP11
XP_009265904 1311 TYRMFFVPKTEDSF 1324 Wallemia ichthyophaga EXF-994
XP_006958815 1124 TYRMFFVPKTEDSF 1137 Wallemia sebi CBS 633.66
XP_007325754  791 TYKVVYEAGGEEav 804  Agaricus bisporus var. burnettii JB137-S8
XP_001829269 1330 SYKLVYESGCEDFi 1343 Coprinopsis cinerea okayama7#130
XP_001874054 1236 TYKMVYESGSEDFL 1249 Laccaria bicolor S238N-H82
XP_007856602 1199 SYKIVYDDGTEEVi 1212 Moniliophthora roreri MCA 2997
XP_003037381 1127 SYKLLYITGTEDVL 1140 Schizophyllum commune H4-8
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